Literature DB >> 33664139

Draft Genome Sequence of Saccharomyces cerevisiae LW2591Y, a Laboratory Strain for In Vivo Multigene Assemblies.

Jennifer Gerke1, Dominik Schneider2, Anja Poehlein2, Virginia W Cornish3, Gerhard H Braus4.   

Abstract

Saccharomyces cerevisiae is an industrially preferred cell factory for the heterologous production of proteins and chemicals. Here, we present the draft genome sequence of the laboratory strain Saccharomyces cerevisiae LW2591Y, which has been designed for robust and efficient assembly of multigene pathways.
Copyright © 2021 Gerke et al.

Entities:  

Year:  2021        PMID： 33664139      PMCID： PMC7936637          DOI： 10.1128/MRA.01418-20

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  12 in total

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Journal:  Genome Res       Date:  2004-07       Impact factor: 9.043

2.  Basic local alignment search tool.

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Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

4.  Reiterative Recombination for the in vivo assembly of libraries of multigene pathways.

Authors:  Laura M Wingler; Virginia W Cornish
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-26       Impact factor: 11.205

5.  Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq.

Authors:  Daniel E Deatherage; Jeffrey E Barrick
Journal:  Methods Mol Biol       Date:  2014

6.  Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.

Authors:  Konstantin Okonechnikov; Ana Conesa; Fernando García-Alcalde
Journal:  Bioinformatics       Date:  2015-10-01       Impact factor: 6.937

7.  A modular yeast biosensor for low-cost point-of-care pathogen detection.

Authors:  Nili Ostrov; Miguel Jimenez; Sonja Billerbeck; James Brisbois; Joseph Matragrano; Alastair Ager; Virginia W Cornish
Journal:  Sci Adv       Date:  2017-06-28       Impact factor: 14.136

8.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

9.  fastp: an ultra-fast all-in-one FASTQ preprocessor.

Authors:  Shifu Chen; Yanqing Zhou; Yaru Chen; Jia Gu
Journal:  Bioinformatics       Date:  2018-09-01       Impact factor: 6.937

10.  CNEr: A toolkit for exploring extreme noncoding conservation.

Authors:  Ge Tan; Dimitris Polychronopoulos; Boris Lenhard
Journal:  PLoS Comput Biol       Date:  2019-08-26       Impact factor: 4.475
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