Literature DB >> 33659696

The complete chloroplast genome sequence of Actinidia arguta var. giraldii.

Fangbing Ding1,2, Lei Zhang1,2, Yaling Wang1,2, Yongpeng Wu1,2, Fengwei Wang1,2, Yu Zhao1,2, Ying Zhang1,2.   

Abstract

The complete chloroplast (cp) genome sequence of Actinidia arguta var. giraldii (Diels) Vorosch. was assembled and characterized by Illumina pair-end sequencing date. The complete plastid genome was 156,729 bp in length, containing a large single-copy (LSC) of 89,647 bp, and a small single-copy (SSC) of 22,482 bp, which was separated by a pair of 22,300 bp inverted repeat regions (IR). A total of 131 unique genes were identified, including 84 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. The phylogenetic position based on the chloroplast genome of 11 species showed that A. arguta var. giraldii was sister to Actinidia kolomikta.
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Actinidia arguta var. giraldii; Actinidiaceae; chloroplast genome; phylogenetic analysis

Year:  2021        PMID: 33659696      PMCID: PMC7872529          DOI: 10.1080/23802359.2020.1870884

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  The comparative studies of complete chloroplast genomes in Actinidia (Actinidiaceae): novel insights into heterogenous variation, clpP gene annotation and phylogenetic relationships.

Authors:  Linchao Wang; Bo Liu; Yuruo Yang; Qiguo Zhuang; Shijia Chen; Yongsheng Liu; Shengxiong Huang
Journal:  Mol Genet Genomics       Date:  2022-02-17       Impact factor: 3.291

  1 in total

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