Literature DB >> 33659578

Rapid Generation of Human Neuronal Cell Models Enabling Inducible Expression of Proteins-of-interest for Functional Studies.

Xinzhu Wang1,2, Erik Friesen2, Iris Müller1, Mackenzie Lemieux1, Ramona Dukart2, Isabella Bl Maia1, Suneil Kalia2, Gerold Schmitt-Ulms1,2.   

Abstract

CRISPR-Cas9 technology has transformed the ability to edit genomic sequences and control gene expression with unprecedented ease and scale. However, precise genomic insertions of coding sequences using this technology remain time-consuming and inefficient because they require introducing adjacent single-strand cuts through Cas9 nickase action and invoking the host-encoded homology-directed repair program through the concomitant introduction of large repair templates. Here, we present a system for the rapid study of any protein-of-interest in two neuronal cell models following its inducible expression from the human AAVS1 safe harbor locus. With lox-flanked foundation cassettes in the AAVS1 site and a tailor-made plasmid for accepting coding sequences-of-interest in place, the system allows investigators to produce their own neuronal cell models for the inducible expression of any coding sequence in less than a month. Due to the availability of preinserted enhanced green fluorescent protein (EGFP) coding sequences that can be fused to the protein-of-interest, the system facilitates functional investigations that track a protein-of-interest by live-cell microscopy as well as interactome analyses that capitalize on the availability of exquisitely efficient EGFP capture matrices.
Copyright © 2020 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  AAVS1; CRISPR-Cas9; EGFP; Human neuronal cells; Inducible expression; Protein-of-interest

Year:  2020        PMID: 33659578      PMCID: PMC7842556          DOI: 10.21769/BioProtoc.3615

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  7 in total

1.  Functional genomics, proteomics, and regulatory DNA analysis in isogenic settings using zinc finger nuclease-driven transgenesis into a safe harbor locus in the human genome.

Authors:  Russell C DeKelver; Vivian M Choi; Erica A Moehle; David E Paschon; Dirk Hockemeyer; Sebastiaan H Meijsing; Yasemin Sancak; Xiaoxia Cui; Eveline J Steine; Jeffrey C Miller; Phillip Tam; Victor V Bartsevich; Xiangdong Meng; Igor Rupniewski; Sunita M Gopalan; Helena C Sun; Kathleen J Pitz; Jeremy M Rock; Lei Zhang; Gregory D Davis; Edward J Rebar; Iain M Cheeseman; Keith R Yamamoto; David M Sabatini; Rudolf Jaenisch; Philip D Gregory; Fyodor D Urnov
Journal:  Genome Res       Date:  2010-05-27       Impact factor: 9.043

2.  Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity.

Authors:  F Ann Ran; Patrick D Hsu; Chie-Yu Lin; Jonathan S Gootenberg; Silvana Konermann; Alexandro E Trevino; David A Scott; Azusa Inoue; Shogo Matoba; Yi Zhang; Feng Zhang
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

3.  A versatile nanotrap for biochemical and functional studies with fluorescent fusion proteins.

Authors:  Ulrich Rothbauer; Kourosh Zolghadr; Serge Muyldermans; Aloys Schepers; M Cristina Cardoso; Heinrich Leonhardt
Journal:  Mol Cell Proteomics       Date:  2007-10-21       Impact factor: 5.911

4.  Effects of Cellular Methylation on Transgene Expression and Site-Specific Integration of Adeno-Associated Virus.

Authors:  Diptiman Chanda; Jonathan A Hensel; Jerome T Higgs; Rajat Grover; Niroop Kaza; Selvarangan Ponnazhagan
Journal:  Genes (Basel)       Date:  2017-09-18       Impact factor: 4.096

5.  Tau interactome analyses in CRISPR-Cas9 engineered neuronal cells reveal ATPase-dependent binding of wild-type but not P301L Tau to non-muscle myosins.

Authors:  Xinzhu Wang; Declan Williams; Iris Müller; Mackenzie Lemieux; Ramona Dukart; Isabella B L Maia; Hansen Wang; Amanda L Woerman; Gerold Schmitt-Ulms
Journal:  Sci Rep       Date:  2019-11-07       Impact factor: 4.379

6.  Differential development of neuronal physiological responsiveness in two human neural stem cell lines.

Authors:  Roberta Donato; Erik A Miljan; Susan J Hines; Sihem Aouabdi; Kenneth Pollock; Sara Patel; Frances A Edwards; John D Sinden
Journal:  BMC Neurosci       Date:  2007-05-25       Impact factor: 3.288

Review 7.  The road less traveled: strategies to enhance the frequency of homology-directed repair (HDR) for increased efficiency of CRISPR/Cas-mediated transgenesis.

Authors:  Sushil Devkota
Journal:  BMB Rep       Date:  2018-09       Impact factor: 4.778

  7 in total

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