Literature DB >> 33659550

Quantitative Determination of Ca2+-binding to Ca2+-sensor Proteins by Isothermal Titration Calorimetry.

Seher Abbas1, Karl-Wilhelm Koch1.   

Abstract

Diverse and complex molecular recognitions are central elements of signal transduction cascades. The strength and nature of these interaction modes can be determined by different experimental approaches. Among those, Isothermal titration calorimetry (ITC) offers certain advantages by providing binding constants and thermodynamic parameters from titration series without a need to label or immobilize one or more interaction partners. Furthermore, second messenger homeostasis involving Ca2+-ions requires in particular knowledge about stoichiometries and affinities of Ca2+-binding to Ca2+-sensor proteins or Ca2+-dependent regulators, which can be obtained by employing ITC. We used ITC to measure these parameters for a set of neuronal Ca2+-sensor proteins operating in photoreceptor cells. Here, we present a step wise protocol to (a) measure Ca2+ interaction with the Ca2+-sensor guanylate cyclase-activating protein 1, (b) to design an ITC experiment and prepare samples, (c) to remove Ca2+ nearly completely from Ca2+ binding proteins without using a chelating agent like EGTA.
Copyright © 2020 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Ca2+-binding ; Ca2+-titration ; Neuronal Ca2+-sensor proteins ; Decalcification; GCAPs; Isothermal titration calorimetry

Year:  2020        PMID: 33659550      PMCID: PMC7842691          DOI: 10.21769/BioProtoc.3580

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  26 in total

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Authors:  M M Pierce; C S Raman; B T Nall
Journal:  Methods       Date:  1999-10       Impact factor: 3.608

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Authors:  W H Ward; G A Holdgate
Journal:  Prog Med Chem       Date:  2001

Review 3.  Applications of calorimetric methods to drug discovery and the study of protein interactions.

Authors:  Patricia C Weber; F Raymond Salemme
Journal:  Curr Opin Struct Biol       Date:  2003-02       Impact factor: 6.809

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Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

5.  Calorimetric methods for interpreting protein-ligand interactions.

Authors:  H F Fisher; N Singh
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

6.  SSB binding to ssDNA using isothermal titration calorimetry.

Authors:  Alexander G Kozlov; Timothy M Lohman
Journal:  Methods Mol Biol       Date:  2012

7.  Structural energetics of protein-carbohydrate interactions: Insights derived from the study of lysozyme binding to its natural saccharide inhibitors.

Authors:  Enrique García-Hernández; Rafael A Zubillaga; Eneas A Chavelas-Adame; Edgar Vázquez-Contreras; Arturo Rojo-Domínguez; Miguel Costas
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

8.  New calcium indicators and buffers with high selectivity against magnesium and protons: design, synthesis, and properties of prototype structures.

Authors:  R Y Tsien
Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

9.  Molecular Recognition of Rhodopsin Kinase GRK1 and Recoverin Is Tuned by Switching Intra- and Intermolecular Electrostatic Interactions.

Authors:  Seher Abbas; Valerio Marino; Daniele Dell'Orco; Karl-Wilhelm Koch
Journal:  Biochemistry       Date:  2019-10-21       Impact factor: 3.162

10.  Functional Status of Neuronal Calcium Sensor-1 Is Modulated by Zinc Binding.

Authors:  Philipp O Tsvetkov; Andrei Yu Roman; Viktoriia E Baksheeva; Aliya A Nazipova; Marina P Shevelyova; Vasiliy I Vladimirov; Michelle F Buyanova; Dmitry V Zinchenko; Andrey A Zamyatnin; François Devred; Andrey V Golovin; Sergei E Permyakov; Evgeni Yu Zernii
Journal:  Front Mol Neurosci       Date:  2018-12-14       Impact factor: 5.639

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  2 in total

1.  Label-free Quantification of Direct Protein-protein Interactions with Backscattering Interferometry.

Authors:  Seher Abbas; Karl-Wilhelm Koch
Journal:  Bio Protoc       Date:  2021-12-20

2.  EF-hand protein, EfhP, specifically binds Ca2+ and mediates Ca2+ regulation of virulence in a human pathogen Pseudomonas aeruginosa.

Authors:  Biraj B Kayastha; Aya Kubo; Jacob Burch-Konda; Rosalie L Dohmen; Jacee L McCoy; Rendi R Rogers; Sergio Mares; Justin Bevere; Annalisa Huckaby; William Witt; Shuxia Peng; Bharat Chaudhary; Smita Mohanty; Mariette Barbier; Gabriel Cook; Junpeng Deng; Marianna A Patrauchan
Journal:  Sci Rep       Date:  2022-05-25       Impact factor: 4.996

  2 in total

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