Literature DB >> 33659405

Optogenetic Tuning of Protein-protein Binding in Bilayers Using LOVTRAP.

Doug Tischer1, Orion D Weiner2.   

Abstract

Modern microscopy methods are powerful tools for studying live cell signaling and biochemical reactions, enabling us to observe when and where these reactions take place from the level of a cell down to single molecules. With microscopy, each cell or molecule can be observed both before and after a given perturbation, facilitating better inference of cause and effect than is possible with destructive modes of signaling quantitation. As many inputs to cell signaling and biochemical systems originate as protein-protein interactions near the cell membrane, an outstanding challenge lies in controlling the timing, location and the magnitude of protein-protein interactions in these unique environments. Here, we detail our procedure for manipulating such spatial and temporal protein-protein interactions in a closed microscopy system using a LOVTRAP-based light-responsive protein-protein interaction system on a supported lipid bilayer. The system responds in seconds and can pattern details down to the one micron level. We used this technique to unlock fundamental aspects of T cell signaling, and this approach is generalizable to many other cell signaling and biochemical contexts.
Copyright © The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Cell signaling; In-vitro reconstitution; LOV2; Microscopy; Optogenetics; Supported lipid bilayers

Year:  2020        PMID: 33659405      PMCID: PMC7842827          DOI: 10.21769/BioProtoc.3745

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  7 in total

1.  Fiji: an open-source platform for biological-image analysis.

Authors:  Johannes Schindelin; Ignacio Arganda-Carreras; Erwin Frise; Verena Kaynig; Mark Longair; Tobias Pietzsch; Stephan Preibisch; Curtis Rueden; Stephan Saalfeld; Benjamin Schmid; Jean-Yves Tinevez; Daniel James White; Volker Hartenstein; Kevin Eliceiri; Pavel Tomancak; Albert Cardona
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

2.  Advanced methods of microscope control using μManager software.

Authors:  Arthur D Edelstein; Mark A Tsuchida; Nenad Amodaj; Henry Pinkard; Ronald D Vale; Nico Stuurman
Journal:  J Biol Methods       Date:  2014

3.  A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.

Authors:  Marcus J Taylor; Kabir Husain; Zev J Gartner; Satyajit Mayor; Ronald D Vale
Journal:  Cell       Date:  2017-03-23       Impact factor: 41.582

4.  Using optogenetics to interrogate the dynamic control of signal transmission by the Ras/Erk module.

Authors:  Jared E Toettcher; Orion D Weiner; Wendell A Lim
Journal:  Cell       Date:  2013-12-05       Impact factor: 41.582

5.  Light-based feedback for controlling intracellular signaling dynamics.

Authors:  Jared E Toettcher; Delquin Gong; Wendell A Lim; Orion D Weiner
Journal:  Nat Methods       Date:  2011-09-11       Impact factor: 28.547

6.  Light-based tuning of ligand half-life supports kinetic proofreading model of T cell signaling.

Authors:  Doug K Tischer; Orion David Weiner
Journal:  Elife       Date:  2019-04-05       Impact factor: 8.140

7.  LOVTRAP: an optogenetic system for photoinduced protein dissociation.

Authors:  Hui Wang; Marco Vilela; Andreas Winkler; Miroslaw Tarnawski; Ilme Schlichting; Hayretin Yumerefendi; Brian Kuhlman; Rihe Liu; Gaudenz Danuser; Klaus M Hahn
Journal:  Nat Methods       Date:  2016-07-18       Impact factor: 28.547

  7 in total

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