Literature DB >> 33659298

Molecular Size Analysis of Recombinant Importin-histone Complexes Using Analytical Ultracentrifugation.

Abhilash Padavannil1, Chad A Brautigam2, Yuh Min Chook1.   

Abstract

Histones constitute the protein components of nucleosomes. Despite their small sizes, histones do not diffuse through the nuclear pore complex. Instead, they are transported to the nucleus by importins, either alone or in complex with histone chaperones. Determining the molecular size of the importin-histone complexes is key to understanding the mechanism of histone transport and also the potential roles of importins as histone chaperones and in the assembly of nucleosomes. Here we report a simple and reproducible sedimentation-velocity based method to determine the molecular sizes of importin-histone complexes using analytical ultracentrifugation. The method does not use any reporter tags or interaction with column resin thereby analyzing the interactions of the native proteins.
Copyright © The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Year:  2020        PMID: 33659298      PMCID: PMC7842336          DOI: 10.21769/BioProtoc.3625

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  18 in total

Review 1.  Expression and purification of recombinant histones and nucleosome reconstitution.

Authors:  K Luger; T J Rechsteiner; T J Richmond
Journal:  Methods Mol Biol       Date:  1999

2.  Distinct importin recognition properties of histones and chromatin assembly factors.

Authors:  M Johnson-Saliba; N A Siddon; M J Clarkson; D J Tremethick; D A Jans
Journal:  FEBS Lett       Date:  2000-02-11       Impact factor: 4.124

3.  Size-distribution analysis of proteins by analytical ultracentrifugation: strategies and application to model systems.

Authors:  Peter Schuck; Matthew A Perugini; Noreen R Gonzales; Geoffrey J Howlett; Dieter Schubert
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

4.  Pathways mediating the nuclear import of histones H3 and H4 in yeast.

Authors:  Nima Mosammaparast; Yurong Guo; Jeffrey Shabanowitz; Donald F Hunt; Lucy F Pemberton
Journal:  J Biol Chem       Date:  2001-11-01       Impact factor: 5.157

5.  A role for nucleosome assembly protein 1 in the nuclear transport of histones H2A and H2B.

Authors:  Nima Mosammaparast; Courtney S Ewart; Lucy F Pemberton
Journal:  EMBO J       Date:  2002-12-02       Impact factor: 11.598

6.  Recorded scan times can limit the accuracy of sedimentation coefficients in analytical ultracentrifugation.

Authors:  Huaying Zhao; Rodolfo Ghirlando; Grzegorz Piszczek; Ute Curth; Chad A Brautigam; Peter Schuck
Journal:  Anal Biochem       Date:  2013-02-28       Impact factor: 3.365

7.  Importins fulfil a dual function as nuclear import receptors and cytoplasmic chaperones for exposed basic domains.

Authors:  Stefan Jäkel; José-Manuel Mingot; Petra Schwarzmaier; Enno Hartmann; Dirk Görlich
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

8.  Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone.

Authors:  Abhilash Padavannil; Prithwijit Sarkar; Seung Joong Kim; Tolga Cagatay; Jenny Jiou; Chad A Brautigam; Diana R Tomchick; Andrej Sali; Sheena D'Arcy; Yuh Min Chook
Journal:  Elife       Date:  2019-03-11       Impact factor: 8.140

9.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

10.  Assembly, loading, and alignment of an analytical ultracentrifuge sample cell.

Authors:  Andrea Balbo; Huaying Zhao; Patrick H Brown; Peter Schuck
Journal:  J Vis Exp       Date:  2009-11-05       Impact factor: 1.355

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  1 in total

1.  A specific role for importin-5 and NASP in the import and nuclear hand-off of monomeric H3.

Authors:  Alonso Javier Pardal; Andrew James Bowman
Journal:  Elife       Date:  2022-09-06       Impact factor: 8.713

  1 in total

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