Literature DB >> 33659024

IFI16 Can Be Used as a Biomarker for Diagnosis of Renal Cell Carcinoma and Prediction of Patient Survival.

Baozhong Yu1, Xiang Zheng2, Zejia Sun1, Peng Cao2, Jiandong Zhang2, Wei Wang1.   

Abstract

The incidences of renal cell carcinoma (RCC) increase in number each year and account for about 2-3% of all malignant tumors. Many patients have metastasis by the time of diagnosis, and their prognosis is poor. Therefore, it is essential that new diagnostic and prognostic markers for kidney cancer are identified. In this study, we assessed the potential of IFI16 as a diagnostic and prognostic marker for RCC. We analyzed the TCGA and UALCAN databases and found IFI16 to be highly expressed in ccRCC. In addition, high IFI16 levels positively correlated with lymphatic metastasis, tumor stage, and histopathological grade. Kaplan-Meier curve analysis showed that IFI16 expression was related to the prognosis of patients, and high IFI16 expression indicated a worse overall survival (p = 5.1E-0.7). Receiver operating characteristic curve analysis showed that a combination of IFI16 expression and histopathological grade improved predictive accuracy (AUC = 0.697; 95%CI: 0.628-0.765, P < 0.001). Finally, the relative levels of IFI16 in ACHN and Caki-1 cells were higher than that of HK-2 cells by western blotting analysis and RT-PCR. Functional tests showed that knocking down IFI16 expression inhibited migration and invasion in vitro. Therefore, IFI16 is a potential biomarker for the diagnosis and prognosis of RCC patients.
Copyright © 2021 Yu, Zheng, Sun, Cao, Zhang and Wang.

Entities:  

Keywords:  IFI16; biomarkers; clear cell renal cell carcinoma; diagnosis; prognosis

Year:  2021        PMID: 33659024      PMCID: PMC7917296          DOI: 10.3389/fgene.2021.599952

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  4 in total

1.  A study on DNA methylation modifying natural compounds identified EGCG for induction of IFI16 gene expression related to the innate immune response in cancer cells.

Authors:  Mohammad Imran Khan; Suza Mohammad Nur; Wesam H Abdulaal
Journal:  Oncol Lett       Date:  2022-05-19       Impact factor: 3.111

2.  Comprehensive analysis identifies IFI16 as a novel signature associated with overall survival and immune infiltration of skin cutaneous melanoma.

Authors:  Hanwen Wang; Xiaoxia Xie; Junyou Zhu; Shaohai Qi; Julin Xie
Journal:  Cancer Cell Int       Date:  2021-12-20       Impact factor: 5.722

Review 3.  DNA and RNA Binding Proteins: From Motifs to Roles in Cancer.

Authors:  Ondrej Bonczek; Lixiao Wang; Sivakumar Vadivel Gnanasundram; Sa Chen; Lucia Haronikova; Filip Zavadil-Kokas; Borivoj Vojtesek
Journal:  Int J Mol Sci       Date:  2022-08-18       Impact factor: 6.208

4.  Overexpression of Interferon-Inducible Protein 16 Promotes Progression of Human Pancreatic Adenocarcinoma Through Interleukin-1β-Induced Tumor-Associated Macrophage Infiltration in the Tumor Microenvironment.

Authors:  Jing-Xian Chen; Chien-Shan Cheng; Hong-Fang Gao; Zi-Jie Chen; Ling-Ling Lv; Jia-Yue Xu; Xiao-Heng Shen; Jing Xie; Lan Zheng
Journal:  Front Cell Dev Biol       Date:  2021-06-04
  4 in total

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