Literature DB >> 33659022

SARS CoV-2 Spike Protein in silico Interaction With ACE2 Receptors From Wild and Domestic Species.

Santiago Rendon-Marin1, Marlen Martinez-Gutierrez1,2, Gary R Whittaker3, Javier A Jaimes3, Julian Ruiz-Saenz1.   

Abstract

The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been declared a pandemic by the World Health Organization (WHO), and since its first report, it has become a major public health concern. SARS-CoV-2 is closely related to SARS-CoV and SARS-related bat coronaviruses, and it has been described to use angiotensin-converting enzyme 2 (ACE2) as a receptor. Natural SARS-CoV-2 infection in domestic and wildlife animals, measured by RT-qPCR, has been confirmed in different countries, especially from the Felidae family. In silico analysis of the interaction between the SARS-CoV-2 spike protein and the cellular receptor ACE2 in various animal species has suggested that wild felids and domestic cats could be susceptible to SARS-CoV-2 based on this interaction. Here, we performed a protein-protein molecular docking analysis of SARS-CoV-2 spike protein with the ACE2 receptor from different animals to elucidate the potential of those species as intermediate hosts or susceptible animals for SARS-CoV-2 infection. Compared to human ACE2, we found that ACE2 receptors from domestic cats and tigers could efficiently interact with RBD of SARS CoV-2 Spike protein. However, dog, ferret, and hamster ACE2 receptor interaction with SARS-CoV-2 S protein RBD was not predicted as favorable, demonstrating a potential differentiated susceptibility in the evaluated species.
Copyright © 2021 Rendon-Marin, Martinez-Gutierrez, Whittaker, Jaimes and Ruiz-Saenz.

Entities:  

Keywords:  COVID-19; SARS-CoV-2; homology modeling; molecular docking; spike protein

Year:  2021        PMID: 33659022      PMCID: PMC7917236          DOI: 10.3389/fgene.2021.571707

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  5 in total

Review 1.  Methodology-Centered Review of Molecular Modeling, Simulation, and Prediction of SARS-CoV-2.

Authors:  Kaifu Gao; Rui Wang; Jiahui Chen; Limei Cheng; Jaclyn Frishcosy; Yuta Huzumi; Yuchi Qiu; Tom Schluckbier; Xiaoqi Wei; Guo-Wei Wei
Journal:  Chem Rev       Date:  2022-05-20       Impact factor: 72.087

2.  Fruit Bromelain-Derived Peptide Potentially Restrains the Attachment of SARS-CoV-2 Variants to hACE2: A Pharmacoinformatics Approach.

Authors:  Trina Ekawati Tallei; Ahmad Akroman Adam; Mona M Elseehy; Ahmed M El-Shehawi; Eman A Mahmoud; Adinda Dwi Tania; Nurdjannah Jane Niode; Diah Kusumawaty; Souvia Rahimah; Yunus Effendi; Rinaldi Idroes; Ismail Celik; Md Jamal Hossain; Talha Bin Emran
Journal:  Molecules       Date:  2022-01-01       Impact factor: 4.411

3.  Development of an in vitro model for animal species susceptibility to SARS-CoV-2 replication based on expression of ACE2 and TMPRSS2 in avian cells.

Authors:  Darrell R Kapczynski; Ryan Sweeney; Erica Spackman; Mary Pantin-Jackwood; David L Suarez
Journal:  Virology       Date:  2022-02-12       Impact factor: 3.616

4.  Variations in Cell Surface ACE2 Levels Alter Direct Binding of SARS-CoV-2 Spike Protein and Viral Infectivity: Implications for Measuring Spike Protein Interactions with Animal ACE2 Orthologs.

Authors:  Soheila Kazemi; Alberto Domingo López-Muñoz; Jaroslav Hollý; Ling Jin; Jonathan W Yewdell; Brian P Dolan
Journal:  J Virol       Date:  2022-08-24       Impact factor: 6.549

5.  Variations in cell-surface ACE2 levels alter direct binding of SARS-CoV-2 Spike protein and viral infectivity: Implications for measuring Spike protein interactions with animal ACE2 orthologs.

Authors:  Soheila Kazemi; Alberto Domingo López-Muñoz; Jaroslav Hollý; Ling Jin; Jonathan W Yewdell; Brian P Dolan
Journal:  bioRxiv       Date:  2021-10-22
  5 in total

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