Literature DB >> 33657968

Using molecular transmission networks to understand the epidemic characteristics of HIV-1 CRF08_BC across China.

Kang Li1,2, Meiliang Liu3, Huanhuan Chen4, Jianjun Li4, Yanling Liang2,3, Yi Feng2, Hui Xing2, Yiming Shao1,2,4.   

Abstract

HIV-1 CRF08_BC has become a major epidemic in heterosexuals and intravenous drug users (IDUs) in southern China. In order to evaluate the trends of its epidemic and facilitate targeted HIV prevention, we constructed the genetic transmission networks based on its pol sequences, derived from the National HIV Molecular Epidemiology Survey. Through retrospective network analysis, to study the epidemiological and demographic correlations with the transmission network. Of the 1,829 study subjects, 639 (34.9%) were clustered in 151 transmission networks. Factors associated with increased clustering include IDUs, heterosexual men, young adults and people with lower education (P < 0.05 for all). The IDUs, MSM, young adult and person with low education had more potential transmission links as well (P < 0.05 for all). The most crossover links were found between heterosexual women and IDUs, with 30.9% heterosexual women linked to IDUs. The crossover links heterosexual women were mainly those with middle age and single (P < 0.001). This study indicated that the HIV-1 CRF08_BC epidemic was still on going in China with more than one third of the infected people clustered in the transmission networks. Meanwhile, the study could help identify the active CRF08_BC spreader in the local community and greatly facilitate précising AIDS prevention with targeted intervention.

Entities:  

Keywords:  CRF08_BC; HIV-1; molecular epidemiology; risk factors; transmission cluster

Year:  2021        PMID: 33657968      PMCID: PMC7993390          DOI: 10.1080/22221751.2021.1899056

Source DB:  PubMed          Journal:  Emerg Microbes Infect        ISSN: 2222-1751            Impact factor:   7.163


  43 in total

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Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-09-11

2.  Networks and viral evolution.

Authors:  W M Fitch
Journal:  J Mol Evol       Date:  1997       Impact factor: 2.395

3.  Growth of HIV-1 Molecular Transmission Clusters in New York City.

Authors:  Joel O Wertheim; Ben Murrell; Sanjay R Mehta; Lisa A Forgione; Sergei L Kosakovsky Pond; Davey M Smith; Lucia V Torian
Journal:  J Infect Dis       Date:  2018-11-05       Impact factor: 5.226

4.  Using Molecular HIV Surveillance Data to Understand Transmission Between Subpopulations in the United States.

Authors:  Alexandra M Oster; Joel O Wertheim; Angela L Hernandez; Marie Cheryl Bañez Ocfemia; Neeraja Saduvala; H Irene Hall
Journal:  J Acquir Immune Defic Syndr       Date:  2015-12-01       Impact factor: 3.731

5.  An automated method for finding molecular complexes in large protein interaction networks.

Authors:  Gary D Bader; Christopher W V Hogue
Journal:  BMC Bioinformatics       Date:  2003-01-13       Impact factor: 3.169

6.  Detailed Transmission Network Analysis of a Large Opiate-Driven Outbreak of HIV Infection in the United States.

Authors:  Ellsworth M Campbell; Hongwei Jia; Anupama Shankar; Debra Hanson; Wei Luo; Silvina Masciotra; S Michele Owen; Alexandra M Oster; Romeo R Galang; Michael W Spiller; Sara J Blosser; Erika Chapman; Jeremy C Roseberry; Jessica Gentry; Pamela Pontones; Joan Duwve; Paula Peyrani; Ron M Kagan; Jeannette M Whitcomb; Philip J Peters; Walid Heneine; John T Brooks; William M Switzer
Journal:  J Infect Dis       Date:  2017-11-27       Impact factor: 5.226

7.  HIV-1 genotype is independently associated with immunodeficiency progression among Chinese men who have sex with men: an observational cohort study.

Authors:  Y Liang; Z Han; J Shui; W Cheng; F Zhong; Q Cai; H Wang; H Wu; H Xu; S Tang
Journal:  HIV Med       Date:  2019-12-21       Impact factor: 3.180

8.  A comprehensive mapping of HIV-1 genotypes in various risk groups and regions across China based on a nationwide molecular epidemiologic survey.

Authors:  Xiang He; Hui Xing; Yuhua Ruan; Kunxue Hong; Chunlin Cheng; Yuanyuan Hu; Ruolei Xin; Jing Wei; Yi Feng; Jenny H Hsi; Yutaka Takebe; Yiming Shao
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

9.  Social and Genetic Networks of HIV-1 Transmission in New York City.

Authors:  Joel O Wertheim; Sergei L Kosakovsky Pond; Lisa A Forgione; Sanjay R Mehta; Ben Murrell; Sharmila Shah; Davey M Smith; Konrad Scheffler; Lucia V Torian
Journal:  PLoS Pathog       Date:  2017-01-09       Impact factor: 6.823

10.  Geographic origin and evolutionary history of China's two predominant HIV-1 circulating recombinant forms, CRF07_BC and CRF08_BC.

Authors:  Yi Feng; Yutaka Takebe; Huamian Wei; Xiang He; Jenny H Hsi; Zhenpeng Li; Hui Xing; Yuhua Ruan; Yao Yang; Fan Li; Jing Wei; Xingguang Li; Yiming Shao
Journal:  Sci Rep       Date:  2016-01-14       Impact factor: 4.379

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  1 in total

1.  Impacts of HIV-1 Subtype Diversity on Long-Term Clinical Outcomes in Antiretroviral Therapy in Guangxi, China.

Authors:  He Jiang; Guanghua Lan; Qiuying Zhu; Yi Feng; Shujia Liang; Jianjun Li; Xinjuan Zhou; Mei Lin; Yiming Shao
Journal:  J Acquir Immune Defic Syndr       Date:  2022-04-15       Impact factor: 3.771

  1 in total

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