| Literature DB >> 33654981 |
Larry Xi1, Patrick Leong1, Aleksandar Mihajlovic1.
Abstract
Single-cell DNA sequencing is a powerful tool to evaluate the state of heterogeneity of heterogeneous tissues like cancer in a quantitative manner that bulk sequencing can never achieve. DOP-PCR (Degenerate Oligonucleotide-Primed Polymerase Chain Reaction), MDA (Multiple Displacement Amplification), MALBAC (Multiple Annealing and Looping-Based Amplification Cycles), LIANTI (Linear Amplification via Transposon Insertion) and TnBC (Transposon Barcoded) have been the primary choices to prepare single-cell libraries. TnBC library prep method is a simple and versatile methodology, to detect copy number variations or to obtain the absolute copy numbers of genes per cell.Entities:
Keywords: Copy number variation; Nextera; Shallow sequencing; Single-cell; Transposon
Year: 2019 PMID: 33654981 PMCID: PMC7854077 DOI: 10.21769/BioProtoc.3175
Source DB: PubMed Journal: Bio Protoc ISSN: 2331-8325