Literature DB >> 33654809

Optogenetic Inactivation of Transcription Factors in the Early Embryo of Drosophila.

Stephen L McDaniel1, Melissa M Harrison1.   

Abstract

The early embryo of Drosophila melanogaster exists as a rapidly dividing syncytium of nuclei that are transcriptionally silent. Maternally deposited factors are required to awaken the genome and assist in the transition from maternal to zygotic control of development. Because many of these essential factors are maternally deposited and the early nuclear divisions are so rapid, it has been difficult to assess the functional role of transcription factors at discrete points in early embryonic development. To address this issue, we have developed an optogenetic system that can rapidly and reversibly inactivate transcription factors with nuclear-cycle resolution. The temporal precision enabled by this technique will allow a mechanistic understanding of how transcription factors function together to control genome activation and patterning in the early embryo and is likely broadly applicable to factors throughout embryogenesis.
Copyright © 2019 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  CRY2; Drosophila; Embryo; Gene expression; Optogenetics; RNA-seq; Transcription factor; Zygotic genome activation

Year:  2019        PMID: 33654809      PMCID: PMC7854102          DOI: 10.21769/BioProtoc.3296

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

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Review 3.  Mechanisms regulating zygotic genome activation.

Authors:  Katharine N Schulz; Melissa M Harrison
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4.  Continued Activity of the Pioneer Factor Zelda Is Required to Drive Zygotic Genome Activation.

Authors:  Stephen L McDaniel; Tyler J Gibson; Katharine N Schulz; Meilin Fernandez Garcia; Markus Nevil; Siddhant U Jain; Peter W Lewis; Kenneth S Zaret; Melissa M Harrison
Journal:  Mol Cell       Date:  2019-02-20       Impact factor: 17.970

5.  A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster.

Authors:  Danielle C Hamm; Elizabeth D Larson; Markus Nevil; Kelsey E Marshall; Eliana R Bondra; Melissa M Harrison
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7.  Decoding temporal interpretation of the morphogen Bicoid in the early Drosophila embryo.

Authors:  Anqi Huang; Christopher Amourda; Shaobo Zhang; Nicholas S Tolwinski; Timothy E Saunders
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Review 8.  Regulatory principles governing the maternal-to-zygotic transition: insights from Drosophila melanogaster.

Authors:  Danielle C Hamm; Melissa M Harrison
Journal:  Open Biol       Date:  2018-12       Impact factor: 6.411

9.  Rapid embryonic cell cycles defer the establishment of heterochromatin by Eggless/SetDB1 in Drosophila.

Authors:  Charles A Seller; Chun-Yi Cho; Patrick H O'Farrell
Journal:  Genes Dev       Date:  2019-02-26       Impact factor: 11.361

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Authors:  Giorgia Guglielmi; Joseph D Barry; Wolfgang Huber; Stefano De Renzis
Journal:  Dev Cell       Date:  2015-12-07       Impact factor: 12.270

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  2 in total

1.  Premature translation of the Drosophila zygotic genome activator Zelda is not sufficient to precociously activate gene expression.

Authors:  Elizabeth D Larson; Hideyuki Komori; Zoe A Fitzpatrick; Samuel D Krabbenhoft; Cheng-Yu Lee; Melissa Harrison
Journal:  G3 (Bethesda)       Date:  2022-08-25       Impact factor: 3.542

2.  Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation.

Authors:  Anand P Singh; Ping Wu; Sergey Ryabichko; João Raimundo; Michael Swan; Eric Wieschaus; Thomas Gregor; Jared E Toettcher
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  2 in total

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