Literature DB >> 33652343

Synthesis, characterization, reaction mechanism prediction and biological study of mono, bis and tetrakis pyrazole derivatives against Fusarium oxysporum f. sp. Albedinis with conceptual DFT and ligand-protein docking studies.

Yassine Kaddouri1, Farid Abrigach2, Sabir Ouahhoud3, Redouane Benabbes3, Mohamed El Kodadi4, Ali Alsalme5, Nabil Al-Zaqri6, Ismail Warad7, Rachid Touzani2.   

Abstract

Twelve heterocyclic compounds were prepared using the condensation of hydroxymethanol pyrazole derivatives with different primary aminesas example 2-aminothiazole and 1-aminobenzotriazole to have a diverse productin good yield up to 97%. Those ligands were tested against Fusarium oxysporum f. sp. Albedinis fungi (BAYOUD Disease) with IC50 = 25.6-33.2 µg/ml. After experiments, theoretical investigations were done as DFT study to know the ligands molecular reactivity and the-ligandprotein- docking study to know the possible binding between the prepared ligands with two biological targets: FGB1 (Fusarium oxysporum Guanine nucleotide-binding protein beta subunitprimary amino acid sequence) and Fophy (Fusarium oxysporum phytase domain enzyme). Of all the obtained results, the experimental ones were well correlated with the theoretical with the most common thing between those compounds is (Nδ--Nδ+) which is the antifungal pharmacophore as proposed pincers for Foa inhibition. From docking studies over FGB1 and Fophy, the ligand 9 has the best binding energy of -6.4872 kcal/mol in FGB1 active site and -5.5282 kcal/mol in Fophy active site, but better correlation with Fophy than FGB1 which is followed by PLIF graph to get that Arg116, Arg120 and Lys336 are the vital amino acids of fophy protein based the study over the chosen active site.
Copyright © 2021. Published by Elsevier Inc.

Entities:  

Keywords:  Antifungal; Bayoud; DFT; Docking; Fusarium oxysporum; Pyrazole

Year:  2021        PMID: 33652343     DOI: 10.1016/j.bioorg.2021.104696

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  3 in total

Review 1.  A Review of the Recent Development in the Synthesis and Biological Evaluations of Pyrazole Derivatives.

Authors:  Oluwakemi Ebenezer; Michael Shapi; Jack A Tuszynski
Journal:  Biomedicines       Date:  2022-05-12

2.  Aminothiazole-Linked Metal Chelates: Synthesis, Density Functional Theory, and Antimicrobial Studies with Antioxidant Correlations.

Authors:  Sadaf Noreen; Sajjad H Sumrra
Journal:  ACS Omega       Date:  2021-11-24

3.  New N-Alkylated Heterocyclic Compounds as Prospective NDM1 Inhibitors: Investigation of In Vitro and In Silico Properties.

Authors:  Yassine Kaddouri; Btissam Bouchal; Farid Abrigach; Mohamed El Kodadi; Mohammed Bellaoui; Ahmed Elkamhawy; Rachid Touzani; Magda H Abdellattif
Journal:  Pharmaceuticals (Basel)       Date:  2022-06-28
  3 in total

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