| Literature DB >> 33651372 |
Brandon Oubre1, Jean-Francois Daneault2, Kallie Whritenour1, Nergis C Khan3, Christopher D Stephen3,4,5, Jeremy D Schmahmann3,4, Sunghoon Ivan Lee6, Anoopum S Gupta7,8,9.
Abstract
Technologies that enable frequent, objective, and precise measurement of ataxia severity would benefit clinical trials by lowering participation barriers and improving the ability to measure disease state and change. We hypothesized that analyzing characteristics of sub-second movement profiles obtained during a reaching task would be useful for objectively quantifying motor characteristics of ataxia. Participants with ataxia (N=88), participants with parkinsonism (N=44), and healthy controls (N=34) performed a computer tablet version of the finger-to-nose test while wearing inertial sensors on their wrists. Data features designed to capture signs of ataxia were extracted from participants' decomposed wrist velocity time-series. A machine learning regression model was trained to estimate overall ataxia severity, as measured by the Brief Ataxia Rating Scale (BARS). Classification models were trained to distinguish between ataxia participants and controls and between ataxia and parkinsonism phenotypes. Movement decomposition revealed expected and novel characteristics of the ataxia phenotype. The distance, speed, duration, morphology, and temporal relationships of decomposed movements exhibited strong relationships with disease severity. The regression model estimated BARS with a root mean square error of 3.6 points, r2 = 0.69, and moderate-to-excellent reliability. Classification models distinguished between ataxia participants and controls and ataxia and parkinsonism phenotypes with areas under the receiver-operating curve of 0.96 and 0.89, respectively. Movement decomposition captures core features of ataxia and may be useful for objective, precise, and frequent assessment of ataxia in home and clinic environments.Entities:
Keywords: Ataxia; Brief Ataxia Rating Scale; Machine learning; Movement decomposition; Wearable electronic devices
Mesh:
Year: 2021 PMID: 33651372 PMCID: PMC8674173 DOI: 10.1007/s12311-021-01247-6
Source DB: PubMed Journal: Cerebellum ISSN: 1473-4222 Impact factor: 3.847
Participant demographics
| Control | Ataxia | Parkinsonism | |
|---|---|---|---|
| 34 | 88 (total) 4 SCA-1, 2 SCA-2, 11 SCA-3, 7 SCA-6, 10 other SCA, 7 A-T, 3 FA, 7 MSA-C, 1 PSP-C, 3 HSP, 4 AIA, 1 BD, 1 HE, 2 EA, 2 ARCA-1, 1 ARCA-3, 1 CH, 3 DN, 2 SA, 1 FXTAS, 1 GHS, 1 LCHND, 1 SRA, 3 TA, 2 SAOA, 5 SAOAN, 2 ADCA | 44 (total) 42 idiopathic PD, 1 MSA-P, 1 PSP | |
| Age | 21–86 (M ± SD 39.0 ± 18.2) | 5–78 (M ± SD 54.4 ± 18.5) | 45–85 (M ± SD 67.5 ± 8.2) |
| Sex | 13 male, 21 female | 47 male, 41 female | 31 male, 13 female |
| Handedness | 33 right, 1 left | 78 right, 9 left, 1 ambidextrous | 41 right, 3 left |
Disease Severity (total clinical score on BARS [ataxia] or UPDRS [parkinsonism]) | 0–24 (M ± SD 10.5 ± 5.4) | 3–51 (M ± SD 16.3 ± 9.1) |
M mean; SD standard deviation; UPDRS Unified Parkinson’s Disease Rating Scale (Part III Motor Examination); BARS Brief Ataxia Rating Scale; SCA spinocerebellar ataxia; A-T Ataxia-Telangiectasia; FA Friedreich’s Ataxia; MSA-C multiple system atrophy, cerebellar type; MSA-P multiple system atrophy, parkinsonian type; PSP-C progressive supranuclear palsy, cerebellar-dominant; PSP progressive supranuclear palsy; HSP hereditary spastic paraplegia; AIA autoimmune-related ataxia with undefined cause; BD Behcet’s Disease; HE Hashimoto’s Encephalopathy; EA episodic ataxia; ARCA autosomal recessive cerebellar ataxia; CH cerebellar hypoplasia; DN Downbeat Nystagmus with mild ataxia; SA sensory ataxia; FXTAS Fragile X-Associated Tremor/Ataxia Syndrome; GHS Gordon Holmes’ Syndrome; LCHND LCH-related neurodegeneration; SRA stroke-related ataxia; TA transient ataxia, later resolved; SAOA sporadic adult-onset ataxia; SAOAN sporadic adult-onset ataxia with neuropathy; ADCA autosomal dominant cerebellar ataxia with unidentified genetic cause; PD Parkinson’s Disease
Fig. 1a) An illustration of a participant performing the instrumented finger-to-nose test. b) Five seconds of the anteroposterior velocity time-series computed from wrist-worn inertial sensor data. The time-series of three participants with different Brief Ataxia Rating Scale (BARS) scores are shown. Movement elements are obtained by segmenting the time-series at the velocity zero-crossings, which are denoted by dashed vertical lines. Movement elements are also independently obtained from both the mediolateral and rostrocaudal velocity time-series. c) The movement element denoted by the solid gray vertical lines. d) The movement element denoted by the solid gray lines after spatial and temporal normalization. The shape is the same, but the velocity has been divided by its mean and resampled
Fig. 3a) A comparison of the distances and directions of consecutive movement elements for each of the four severity groups detailed in the methods. Less-severe groups are more likely to perform large, alternating movements as shown by the density of the diagonal trend. More-severe groups are more likely to perform very small movements as shown by the density of the center region. The red box at the center of the histograms denotes the region used to extract data features for the machine learning models. b) The same comparison, using a smaller range of movement distances to more clearly demonstrate differences between the four severity groups. Densities have been recalculated with respect to the smaller range of the histogram
Fig. 2a) Box plots illustrating the per-participant duration, mean speed, and distance of movement elements for four groups of participants. Circles denote outliers and dashed lines denote the mean of each group. Participants were assigned to each group based on their Brief Ataxia Rating Scale (BARS) scores. Horizontal whiskers and asterisks along the top of each plot denote significantly different means, determined using Welch’s ANOVA and Games-Howell post-hoc tests for p < 0.05. All groups are significantly different for the mean speed and distance. b) Probability density estimates for all movement elements in each of the severity groups, calculated using histograms with uniformly spaced bins. c) Identification of the power-law scaling exponent (α) between movement element distance and mean speed for each severity group. The white line is the least squares linear regression
Fig. 4Movement element shapes in ataxia and control participants. The left plot shows the distribution of spatially and temporally normalized movement elements based on their first two principal components, obtained from a principal component analysis of all ataxia participants and healthy controls. The color corresponds to the relative density of movement elements of ataxia participants and healthy controls. The relative density is calculated as the logarithm of the ratio of movement element densities. A value of 1.0 indicates that movement elements from ataxia participants are ten times more likely to occur and a value of -1.0 indicates that movement elements from healthy controls are ten times more likely to occur. The black boxes in the left plot correspond to the grid of plots on the right. Each plot on the right shows the mean (black line) and standard deviation (shading) of normalized movement elements within the corresponding black box. The color of the shading represents the mean value of the bins within the corresponding box
Fig. 5Box plots illustrating changes in the morphology of movement elements between the first and second halves of the finger-to-nose test for four groups of participants. Circles denote outliers and dashed lines denote the mean of each group. Participants were assigned to each group based on their Brief Ataxia Rating Scale (BARS) scores. A decrease in standard deviation (SD) of each principal component (PC) represents more consistent movement element morphology in the second half of the test. An increase in r2 with the Hoff model indicates more-optimized movement elements in the second half of the test. Asterisks along the top of each plot denote a significant change between the first and second halves of the test for the group, determined using a one sample t-test for p < 0.05
The ten data features with the strongest Pearson correlation coefficients (r) with respect to the clinician-assessed Brief Ataxia Rating Scale scores. All correlations have p < 0.01
| Feature description | |
|---|---|
| -0.73 | Mean of movement element distances (in the log scale). |
| 0.72 | Interquartile range of the (log) ratios of consecutive movement element distances. Higher values correspond to less consistency in the distances traveled during consecutive submovements. |
| -0.72 | The power-law scaling exponent (α) between movement element distances and mean speeds. |
| -0.71 | Median of movement element (log) distances. |
| -0.69 | Median of movement element (log) mean speeds. |
| -0.69 | Mean of movement element (log) mean speeds. |
| 0.65 | Density of small consecutive movement elements with different sizes and the same direction (towards the tablet). Higher values likely correspond to small, more segmented movements during the reaching behavior. |
| -0.64 | Ninetieth percentile of movement element (log) mean speeds. |
| 0.64 | Density of small consecutive movement elements with the same size and direction (towards the tablet). Higher values likely correspond to small, more segmented movements during the reaching behavior. |
| 0.63 | Standard deviation of the (log) ratios of consecutive movement element distances. (i.e., Higher values correspond to less consistency in the distances traveled during consecutive submovements |
Fig. 6a) A scatter plot showing clinician-assessed Brief Ataxia Rating Scale (BARS) scores versus the scores estimated by the machine learning model. The solid black line indicates perfect model performance. b) A scatter plot demonstrating the reliability of the machine learning model by showing changes in the model’s estimates for participants with multiple assessments. The color indicates the absolute change in the clinician-assessed Brief Ataxia Rating Scale (BARS) score. The solid black line indicates that the same score was estimated for each visit and the dotted black lines indicate a difference of 3 BARS points between visits