Literature DB >> 33649949

Phageome Analysis of Bifidobacteria-Rich Samples.

Brian McDonnell1, Eoghan Casey1, Christian Milani2,3, Gabriele Andrea Lugli2, Alice Viappiani3, Jennifer Mahony1, Marco Ventura2, Douwe van Sinderen4.   

Abstract

Bifidobacteria are important early colonizers of the human intestinal tract. The relative abundance of bifidobacterial species may be modulated, in part, by bacteriophage activity. Metagenomic studies of these populations is a crucial step in understanding this important interaction. This chapter outlines the technical instructions required to analyze the virome of a bifidobacteria-rich sample, for example, an infant fecal sample.

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Keywords:  DNA; Fecal; Metagenome; Phage; Sequencing

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Year:  2021        PMID: 33649949     DOI: 10.1007/978-1-0716-1274-3_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  2 in total

1.  [Special sleep phenomenon induced by propagated sensation along channels reaching the head].

Authors:  B H Wu; X L Hu; Z Q You; D L Chen; B Y Yang; L J Ye; B J Li
Journal:  Zhen Ci Yan Jiu       Date:  1987

2.  CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers.

Authors:  Christine Pourcel; Marie Touchon; Nicolas Villeriot; Jean-Philippe Vernadet; David Couvin; Claire Toffano-Nioche; Gilles Vergnaud
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

  2 in total

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