Literature DB >> 33649149

G-Quadruplex Structures in Bacteria - Biological Relevance and Potential as Antimicrobial Target.

Puja Yadav1, Nayun Kim2, Monika Kumari3, Shalini Verma, Tarun Kumar Sharma4, Vikas Yadav5, Amit Kumar6.   

Abstract

DNA strand consisting of multiple runs of guanines can adopt the non-canonical, four-stranded DNA secondary structure known as G-quadruplex or G4 DNA. G4 DNA is thought to play an important role in transcriptional and translational regulation of genes, DNA replication, genome stability, and oncogene expression in eukaryotic genomes. In other organisms including several bacterial pathogens and some plant species, the biological role of G4 DNA and G4 RNA is starting to be explored. Recent investigation showed that G4 DNA and G4 RNA are generally conserved across plant species. In silico analyses of several bacterial genomes identified the putative guanine-rich, G4 DNA-forming sequences in the promoter regions. They were particularly abundant in certain gene classes, suggesting that these highly diverse structures can be employed to regulate expression of genes involved in secondary metabolite synthesis and signal transduction. Furthermore, in the pathogen Mycobacterium tuberculosis, the distribution of G4 motifs and their potential role in the regulation of gene transcription advocate for the use of G4 ligands to develop novel antitubercular therapies. In this review, we discuss the various roles of G4 structures in bacterial DNA and the application of G4 DNA as an inhibitor or therapeutic agent to tackle the bacterial pathogens.
Copyright © 2021 American Society for Microbiology.

Entities:  

Year:  2021        PMID: 33649149     DOI: 10.1128/JB.00577-20

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  9 in total

1.  Probing GFP Chromophore Analogs as Anti-HIV Agents Targeting LTR-III G-Quadruplex.

Authors:  Dmitriy Y Ryazantsev; Mikhail Yu Myshkin; Vera A Alferova; Vladimir B Tsvetkov; Elena Y Shustova; Polina N Kamzeeva; Polina V Kovalets; Elvira R Zaitseva; Nadezhda S Baleeva; Timofei S Zatsepin; Zakhar O Shenkarev; Mikhail S Baranov; Liubov I Kozlovskaya; Andrey V Aralov
Journal:  Biomolecules       Date:  2021-09-26

2.  G-quadruplexes in helminth parasites.

Authors:  Alessio Cantara; Yu Luo; Michaela Dobrovolná; Natalia Bohalova; Miroslav Fojta; Daniela Verga; Lionel Guittat; Anne Cucchiarini; Solène Savrimoutou; Cécile Häberli; Jean Guillon; Jennifer Keiser; Václav Brázda; Jean Louis Mergny
Journal:  Nucleic Acids Res       Date:  2022-03-21       Impact factor: 16.971

3.  G-Quadruplex DNA as a Target in Pathogenic Bacteria: Efficacy of an Extended Naphthalene Diimide Ligand and Its Mode of Action.

Authors:  Rubén Cebrián; Efres Belmonte-Reche; Valentina Pirota; Anne de Jong; Juan Carlos Morales; Mauro Freccero; Filippo Doria; Oscar P Kuipers
Journal:  J Med Chem       Date:  2021-12-20       Impact factor: 7.446

4.  Genome-Wide Transcriptional Response of Mycobacterium smegmatis MC2155 to G-Quadruplex Ligands BRACO-19 and TMPyP4.

Authors:  Egor Shitikov; Dmitry Bespiatykh; Maja Malakhova; Julia Bespyatykh; Ivan Bodoev; Tatiana Vedekhina; Marina Zaychikova; Vladimir Veselovsky; Ksenia Klimina; Elena Ilina; Anna Varizhuk
Journal:  Front Microbiol       Date:  2022-03-04       Impact factor: 5.640

5.  Fused in Liposarcoma Protein, a New Player in the Regulation of HIV-1 Transcription, Binds to Known and Newly Identified LTR G-Quadruplexes.

Authors:  Emanuela Ruggiero; Ilaria Frasson; Elena Tosoni; Matteo Scalabrin; Rosalba Perrone; Maja Marušič; Janez Plavec; Sara N Richter
Journal:  ACS Infect Dis       Date:  2022-05-02       Impact factor: 5.578

6.  Editorial: Biology of non-canonical nucleic acids from humans to pathogens.

Authors:  Ilaria Frasson
Journal:  Front Microbiol       Date:  2022-07-18       Impact factor: 6.064

Review 7.  Essential Roles and Risks of G-Quadruplex Regulation: Recognition Targets of ALS-Linked TDP-43 and FUS.

Authors:  Akira Ishiguro; Akira Ishihama
Journal:  Front Mol Biosci       Date:  2022-07-11

8.  Molecular and Functional Characterization of MobK Protein-A Novel-Type Relaxase Involved in Mobilization for Conjugational Transfer of Klebsiella pneumoniae Plasmid pIGRK.

Authors:  Katarzyna Paulina Nowak; Agnieszka Sobolewska-Ruta; Agata Jagiełło; Anna Bierczyńska-Krzysik; Piotr Kierył; Paweł Wawrzyniak
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

9.  Structured Waters Mediate Small Molecule Binding to G-Quadruplex Nucleic Acids.

Authors:  Stephen Neidle
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-22
  9 in total

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