Literature DB >> 33647833

Diversification of the vertebrate limb: sequencing the events.

Aditya Saxena1, Kimberly L Cooper2.   

Abstract

Naturalists leading up to the early 20th century were captivated by the diversity of limb form and function and described its development in a variety of species. The advent of discoveries in genetics followed by molecular biology led to focused efforts in few 'model' species, namely mouse and chicken, to understand conserved mechanisms of limb axis specification and development of the musculoskeletal system. 'Non-traditional' species largely fell by the wayside until their recent resurgence into the spotlight with advances in next-generation sequencing technologies (NGS). In this review, we focus on how the use of NGS has provided insights into the development, loss, and diversification of amniote limbs. Coupled with advances in chromatin interrogation techniques and functional tests in vivo, NGS is opening possibilities to understand the genetic mechanisms that govern the remarkable radiation of vertebrate limb form and function.
Copyright © 2021 Elsevier Ltd. All rights reserved.

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Year:  2021        PMID: 33647833      PMCID: PMC8364862          DOI: 10.1016/j.gde.2021.02.005

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   4.665


  26 in total

Review 1.  Growing models of vertebrate limb development.

Authors:  Matthew Towers; Cheryll Tickle
Journal:  Development       Date:  2009-01       Impact factor: 6.868

2.  An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice.

Authors:  João Pl Castro; Michelle N Yancoskie; Campbell Rolian; Yingguang Frank Chan; Marta Marchini; Stefanie Belohlavy; Layla Hiramatsu; Marek Kučka; William H Beluch; Ronald Naumann; Isabella Skuplik; John Cobb; Nicholas H Barton
Journal:  Elife       Date:  2019-06-06       Impact factor: 8.140

3.  Shared Enhancer Activity in the Limbs and Phallus and Functional Divergence of a Limb-Genital cis-Regulatory Element in Snakes.

Authors:  Carlos R Infante; Alexandra G Mihala; Sungdae Park; Jialiang S Wang; Kenji K Johnson; James D Lauderdale; Douglas B Menke
Journal:  Dev Cell       Date:  2015-10-01       Impact factor: 12.270

4.  Loss and Re-emergence of Legs in Snakes by Modular Evolution of Sonic hedgehog and HOXD Enhancers.

Authors:  Francisca Leal; Martin J Cohn
Journal:  Curr Biol       Date:  2016-10-20       Impact factor: 10.834

Review 5.  Development of the external genitalia: conserved and divergent mechanisms of appendage patterning.

Authors:  Martin J Cohn
Journal:  Dev Dyn       Date:  2011-04-04       Impact factor: 3.780

6.  A relative shift in cloacal location repositions external genitalia in amniote evolution.

Authors:  Patrick Tschopp; Emma Sherratt; Thomas J Sanger; Anna C Groner; Ariel C Aspiras; Jimmy K Hu; Olivier Pourquié; Jérôme Gros; Clifford J Tabin
Journal:  Nature       Date:  2014-11-05       Impact factor: 49.962

7.  Bat Accelerated Regions Identify a Bat Forelimb Specific Enhancer in the HoxD Locus.

Authors:  Betty M Booker; Tara Friedrich; Mandy K Mason; Julia E VanderMeer; Jingjing Zhao; Walter L Eckalbar; Malcolm Logan; Nicola Illing; Katherine S Pollard; Nadav Ahituv
Journal:  PLoS Genet       Date:  2016-03-28       Impact factor: 5.917

8.  Transcriptomic and epigenomic characterization of the developing bat wing.

Authors:  Walter L Eckalbar; Stephen A Schlebusch; Mandy K Mason; Zoe Gill; Ash V Parker; Betty M Booker; Sierra Nishizaki; Christiane Muswamba-Nday; Elizabeth Terhune; Kimberly A Nevonen; Nadja Makki; Tara Friedrich; Julia E VanderMeer; Katherine S Pollard; Lucia Carbone; Jeff D Wall; Nicola Illing; Nadav Ahituv
Journal:  Nat Genet       Date:  2016-03-28       Impact factor: 38.330

9.  Multiple phases of chondrocyte enlargement underlie differences in skeletal proportions.

Authors:  Kimberly L Cooper; Seungeun Oh; Yongjin Sung; Ramachandra R Dasari; Marc W Kirschner; Clifford J Tabin
Journal:  Nature       Date:  2013-03-13       Impact factor: 49.962

10.  Molecular shifts in limb identity underlie development of feathered feet in two domestic avian species.

Authors:  Eric T Domyan; Zev Kronenberg; Carlos R Infante; Anna I Vickrey; Sydney A Stringham; Rebecca Bruders; Michael W Guernsey; Sungdae Park; Jason Payne; Robert B Beckstead; Gabrielle Kardon; Douglas B Menke; Mark Yandell; Michael D Shapiro
Journal:  Elife       Date:  2016-03-15       Impact factor: 8.140

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