| Literature DB >> 33646985 |
Xitong Yang1, Sulian Yang1, Hongyang Xu2, Dan Liu1, Yuanyuan Zhang1, Guangming Wang1.
Abstract
BACKGROUND: Stroke is a serious cardiovascular disease, a major cause of disability and death in both developed and developing countries. Superoxide dismutases (SODs) are enzymes that catalyze the breakdown of superoxide into oxygen and hydrogen peroxide and play a key role in the antioxidant response. This study explored the relationship between single-nucleotide polymorphisms (SNPs) in SOD genes and the risk of ischemic stroke (IS) in the Chinese Han population of Dali City.Entities:
Mesh:
Substances:
Year: 2021 PMID: 33646985 PMCID: PMC8041563 DOI: 10.1097/NRL.0000000000000301
Source DB: PubMed Journal: Neurologist ISSN: 1074-7931 Impact factor: 1.524
Primer Sequences Used in This Study
| SNP | Primer | Sequence |
|---|---|---|
| rs17880487 | CC | 5′-TATTATGAGGCTATTAAAAGAATCC-3′ |
| TT | 5′-TATTATGAGGCTATTAAAAGAATCTT-3′ | |
| Reverse | 5′-ATCAGAGCTAATTTAGTTTGAATTT-3′ | |
| rs80265967 | AA | 5′-GAGACTTGGGCAATGTGACTGCTGA-3′ |
| CC | 5′-GAGACTTGGGCAATGTGACTGCTGC-3′ | |
| Reverse | 5′-AGACACATCGGCCACACCATCTTTG-3′ | |
| rs4880 | CC | 5′-TGCCTGGAGCCCAGATACCCCAAAG-3′ |
| TT | 5′-TGCCTGGAGCCCAGATACCCCAAAA-3′ | |
| Reverse | 5′-AGCACCAGCAGGCAGCTGGCTCCGG-3′ | |
| rs2842960 | CC | 5′-GAGACCAAACATTTCCCCAAAGCAC-3′ |
| TT | 5′-GAGACCAAACATTTCCCCAAAGCAT-3′ | |
| Reverse | 5′-ATTGAAATTGTTCTTGTTGTATAAT-3′ | |
| Rs2695232 | CC | 5′-TTCTCCTCTGCTCCAACAGACACCC-3′ |
| TT | 5′-TTCTCCTCTGCTCCAACAGACACCT-3′ | |
| Reverse | 5′-GGCGAAGGTGAGACCTCAGAGTGGA-3′ | |
| Rs7655372 | AA | 5′-TGCCCTAGATGAGAGATGTGCAGTA-3′ |
| GG | 5′-TGCCCTAGATGAGAGATGTGCAGTG-3′ | |
| Reverse | 5′-CTCCAAGCCCAAGGTTTAGGCACCA-3′ |
SNP indicates single-nucleotide polymorphism.
Characteristics of IS Patients Who Had an IS and Controls
| Characteristics | Patients Who Had an IS | Controls |
|
|---|---|---|---|
| Age (y; mean±SD) | 58.63±12.97 | 57.59±14.01 | 0.516 |
| Male gender (n) | 80 | 68 | 0.824 |
| FBG (mmol/L; mean±SD) | 6.25±2.73 | 4.75±0.87 | 0.000 |
| WBC (1012/L; mean±SD) | 7.79±2.32 | 6.27±1.57 | 0.000 |
| RBC (1012/L; mean±SD) | 4.81±0.72 | 4.97±0.55 | 0.004 |
| TC (mmol/L; mean±SD) | 5.01±1.29 | 4.33±0.42 | 0.000 |
| TG (mmol/L; mean±SD) | 1.72±1.40 | 1.35±0.75 | 0.008 |
| LDL (mmol/L; mean±SD) | 3.05±1.06 | 2.82±0.72 | 0.033 |
| SBP (mm Hg; mean±SD) | 144.92±25.88 | 133.85±15.34 | 0.000 |
| DBP (mm Hg; mean±SD) | 86.46±13.02 | 84.66±10.40 | 0.205 |
| BMI (kg/m2; mean±SD) | 23.15±3.28 | 22.84±3.91 | 0.478 |
BMI indicates body mass index; FBG, fasting blood glucose; IS indicates ischemic stroke; SNP, single-nucleotide polymorphism.
Hardy-Weinberg Results of Control and IS
| χ2 |
| |||
|---|---|---|---|---|
| SNP | Control | IS | Control | IS |
| rsl7880487 | 0.258 | 0.347 | 0.611 | 0.556 |
| rs4880 | 0.21 | 0.55 | 0.65 | 0.46 |
| rs2842960 | 0.68 | 0.23 | 0.41 | 0.63 |
| rs2695232 | 4.078 | 0.155 | 0.053 | 0.693 |
| rs7655372 | 0.07 | 0.589 | 0.786 | 0.442 |
IS indicates ischemic stroke; SNP, single-nucleotide polymorphism.
Genotype Frequencies of SODs Gene Polymorphisms in Cases and Controls and Their Associations With IS
| n (%) | |||||||
|---|---|---|---|---|---|---|---|
| SNP | Genotype | Case | Control | OR (95% CI) |
| Adjusted OR (95% CI) | Adjusted |
| rsl7880487 | CC | 131 (90.97) | 117 (91.41) | Reference | Reference | ||
| CT | 13 (9.03) | 11 (8.59) | 1.056 (0.455-2.447) | 0.900 | 0.879 (0.277-2.789) | 0.827 | |
| TT | 0 | 0 | |||||
| C | 275 (95.49) | 245 (95.70) | Reference | Reference | |||
| T | 13 (4.51) | 11 (4.30) | 1.056 (0.455-2.447) | 0.900 | 0.879 (0.277-2.789) | 0.827 | |
| rs80265967 | AA | 155 (100) | 122 (100) | — | — | — | — |
| rs4880 | TT | 105 (72.92) | 96 (75) | Reference | Reference | ||
| TC | 37 (25.69) | 29 (22.66) | 1.167 (0.667-2.041) | 0.589 | 1.045 (0.486-2.250) | 0.91 | |
| CC | 2 (1.39) | 3 (2.34) | 0.610 (0.10-3.726) | 0.592 | 0.86 (0.104-7.108) | 0.889 | |
| Dominant | CC+CT vs TT | 1.114 (0.647-1.918) | 0.696 | 1.026 (0.490-2.149) | 0.945 | ||
| Recessive | CC vs CT+TT | 0.587 (0.096-3.569) | 0.563 | 0.851 (0.104-6.974) | 0.88 | ||
| T | 247 (85.76) | 221 (86.33) | Reference | Reference | |||
| C | 41 (14.24) | 35 (13.67) | 1.049 (0.643-1.709) | 0.849 | 1.005 (0.527-1.914) | 0.989 | |
| rs2842960 | CC | 106 (73.61) | 94 (73.43) | Reference | Reference | ||
| CT | 34 (23.61) | 30 (23.44) | 1.005 (0.572-1.767) | 0.986 | 0.947 (0.438-2.047) | 0.889 | |
| TT | 4 (2.78) | 4 (3.13) | 0.887 (0.261-3.645) | 0.868 | 0.868 (0.128-5.886) | 0.885 | |
| Dominant | TT+TC vs CC | 0.991 (0.578-1.700) | 0.974 | 0.963 (0.462-2.007) | 0.921 | ||
| Recessive | TT vs TC+CC | 0.886 (0.217-3.616) | 0.866 | 0.105 (0.179-6.832) | 0.915 | ||
| C | 246 (85.42) | 226 (85.61) | Reference | Reference | |||
| T | 42 (14.58) | 38 (14.39) | 0.981 (0.618-1.555) | 0.934 | 0.985 (0.531-1.829) | 0.962 | |
| rs2695232 | CC | 53 (36.81) | 44 (34.37) | Reference | Reference | ||
| CT | 67 (46.53) | 71 (55.47) | 0.783 (0.465-1.319) | 0.358 | 1.024 (0.513-1.829) | 0.962 | |
| TT | 24 (16.66) | 13 (10.16) | 1.533 (0.699-3.358) | 0.286 | 1.334 (0.475-3.742) | 0.585 | |
| Dominant | TT+TC vs CC | 0.899 (0.547-1.479) | 0.676 | 1.083 (0.560-2.094) | 0.813 | ||
| Recessive | TT vs TC+CC | 1.769 (0.860-3.641) | 0.121 | 1.316 (0.506-3.423) | 0.574 | ||
| C | 173 (60.07) | 159 (62.11) | Reference | Reference | 0.65 | ||
| T | 115 (39.93) | 97 (37.89) | 1.096 (0.767-1.567) | 0.614 | 1.117 (0.692-1.803) | 0.65 | |
| rs7655372 | GG | 127 (88.19) | 122 (95.31) | Reference | Reference | ||
| GA | 17 (11.81) | 6 (4.69) | 2.722 (1.039-7.132) | 0.042※ | 5.128 (1.558-16.881) | 0.007 | |
| AA | 0 | 0 | |||||
| G | 271 (94.10) | 250 (97.66) | Reference | Reference | |||
| A | 17 (5.90) | 6 (2.34) | 2.722 (1.039-7.132) | 0.042※ | 5.128 (1.558-16.881) | 0.007 | |
Adjusted by age, sex, fasting blood glucose, red blood cells (RBCs), white blood cells (WBCs), total cholesterol (TC), triglycerides (TG), low-density lipoprotein (LDL), systolic pressure (SPB) and diastolic pressure (DBP).
P-value <0.05 was considered significant.
CI indicates confidence interval; IS, ischemic stroke; SOD, superoxide dismutase.
Rs7655372 Multivariate Logistic Regression Analysis of Independent Risk Factors for IS
| Variables |
| SE | Wals |
| OR | 95% CI |
|---|---|---|---|---|---|---|
| Sex | 0.150 | 0.272 | 0.305 | 0.581 | 1.162 | 0.682-1.979 |
| Age | 0.011 | 0.010 | 1.178 | 0.278 | 1.011 | 0.991-1.032 |
| Hypertension | 2.189 | 0.638 | 11.785 | 0.001 | 8.928 | 2.558-31.156 |
| Hyperlipidemia | 1.057 | 0.275 | 14.798 | 0.000 | 2.879 | 1.680-4.935 |
| Diabetes | 1.105 | 0.320 | 11.948 | 0.001 | 3.020 | 1.614-5.652 |
| GA | 1.159 | 0.527 | 4.832 | 0.028 | 3.188 | 1.134-8.962 |
The genotype GG was defined as 1, logistics regression calibration traditional risk factors (sex, age, hypertension, hyperlipidemia, and diabetes).
B indicates partial regression coefficient; CI, confidence interval; IS, ischemic stroke; OR, odds ratio; SE, standard error of partial regression coefficient; Wals: ratio of square B to SE.