Literature DB >> 33643967

Whole Exome Sequencing Identifies Three Novel Mutations in the ASPM Gene From Saudi Families Leading to Primary Microcephaly.

Muhammad Imran Naseer1,2, Angham Abdulrahman Abdulkareem1,3, Osama Yousef Muthaffar4, Sameera Sogaty5, Hiba Alkhatabi1,6, Sarah Almaghrabi2,7, Adeel G Chaudhary1,2,7.   

Abstract

Autosomal recessive primary microcephaly (MCPH) is a neurodevelopmental defect that is characterized by reduced head circumference at birth along with non-progressive intellectual disability. Till date, 25 genes related to MCPH have been reported so far in humans. The ASPM (abnormal spindle-like, microcephaly-associated) gene is among the most frequently mutated MCPH gene. We studied three different families having primary microcephaly from different regions of Saudi Arabia. Whole exome sequencing (WES) and Sanger sequencing were done to identify the genetic defect. Collectively, three novel variants were identified in the ASPM gene from three different primary microcephaly families. Family 1, showed a deletion mutation leading to a frameshift mutation c.1003del. (p.Val335*) in exon 3 of the ASPM gene and family 2, also showed deletion mutation leading to frameshift mutation c.1047del (p.Gln349Hisfs*18), while in family 3, we identified a missense mutation c.5623A>G leading to a change in protein (p.Lys1875Glu) in exon 18 of the ASPM gene underlying the disorder. The identified respective mutations were ruled out in 100 healthy control samples. In conclusion, we found three novel mutations in the ASPM gene in Saudi families that will help to establish a disease database for specified mutations in Saudi population and will further help to identify strategies to tackle primary microcephaly in the kingdom.
Copyright © 2021 Naseer, Abdulkareem, Muthaffar, Sogaty, Alkhatabi, Almaghrabi and Chaudhary.

Entities:  

Keywords:  ASPM; MCPH; Saudi population; primary microcephaly; whole exom sequencing

Year:  2021        PMID: 33643967      PMCID: PMC7904689          DOI: 10.3389/fped.2020.627122

Source DB:  PubMed          Journal:  Front Pediatr        ISSN: 2296-2360            Impact factor:   3.418


  28 in total

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Authors:  Muhammad Imran Naseer; Mahmood Rasool; Mohammed M Jan; Adeel G Chaudhary; Peter Natesan Pushparaj; Adel M Abuzenadah; Mohammad H Al-Qahtani
Journal:  J Neurol Sci       Date:  2016-10-18       Impact factor: 3.181

2.  Genetic studies of autosomal recessive primary microcephaly in 33 Pakistani families: Novel sequence variants in ASPM gene.

Authors:  Asma Gul; Muhammad Jawad Hassan; Saqib Mahmood; Wenje Chen; Safa Rahmani; Muhammad Imran Naseer; Lisa Dellefave; Noor Muhammad; Muhammad Arshad Rafiq; Muhammad Ansar; Muhammad Salman Chishti; Ghazanfar Ali; Teepu Siddique; Wasim Ahmad
Journal:  Neurogenetics       Date:  2006-04-21       Impact factor: 2.660

3.  Mutations in mouse Aspm (abnormal spindle-like microcephaly associated) cause not only microcephaly but also major defects in the germline.

Authors:  Jeremy N Pulvers; Jarosław Bryk; Jennifer L Fish; Michaela Wilsch-Bräuninger; Yoko Arai; Dora Schreier; Ronald Naumann; Jussi Helppi; Bianca Habermann; Johannes Vogt; Robert Nitsch; Attila Tóth; Wolfgang Enard; Svante Pääbo; Wieland B Huttner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

Review 4.  Evolution of primary microcephaly genes and the enlargement of primate brains.

Authors:  Chris Ponting; Andrew P Jackson
Journal:  Curr Opin Genet Dev       Date:  2005-06       Impact factor: 5.578

Review 5.  Many roads lead to primary autosomal recessive microcephaly.

Authors:  Angela M Kaindl; Sandrine Passemard; Pavan Kumar; Nadine Kraemer; Lina Issa; Angelika Zwirner; Benedicte Gerard; Alain Verloes; Shyamala Mani; Pierre Gressens
Journal:  Prog Neurobiol       Date:  2009-12-02       Impact factor: 11.685

6.  Protein-truncating mutations in ASPM cause variable reduction in brain size.

Authors:  Jacquelyn Bond; Sheila Scott; Daniel J Hampshire; Kelly Springell; Peter Corry; Marc J Abramowicz; Ganesh H Mochida; Raoul C M Hennekam; Eamonn R Maher; Jean-Pierre Fryns; Abdulrahman Alswaid; Hussain Jafri; Yasmin Rashid; Ammar Mubaidin; Christopher A Walsh; Emma Roberts; C Geoffrey Woods
Journal:  Am J Hum Genet       Date:  2003-10-21       Impact factor: 11.025

7.  ASPM is a major determinant of cerebral cortical size.

Authors:  Jacquelyn Bond; Emma Roberts; Ganesh H Mochida; Daniel J Hampshire; Sheila Scott; Jonathan M Askham; Kelly Springell; Meera Mahadevan; Yanick J Crow; Alexander F Markham; Christopher A Walsh; C Geoffrey Woods
Journal:  Nat Genet       Date:  2002-09-23       Impact factor: 38.330

8.  WDR62 is associated with the spindle pole and is mutated in human microcephaly.

Authors:  Adeline K Nicholas; Maryam Khurshid; Julie Désir; Ofélia P Carvalho; James J Cox; Gemma Thornton; Rizwana Kausar; Muhammad Ansar; Wasim Ahmad; Alain Verloes; Sandrine Passemard; Jean-Paul Misson; Susan Lindsay; Fanni Gergely; William B Dobyns; Emma Roberts; Marc Abramowicz; C Geoffrey Woods
Journal:  Nat Genet       Date:  2010-10-03       Impact factor: 38.330

9.  The Drosophila gene abnormal spindle encodes a novel microtubule-associated protein that associates with the polar regions of the mitotic spindle.

Authors:  R D Saunders; M C Avides; T Howard; C Gonzalez; D M Glover
Journal:  J Cell Biol       Date:  1997-05-19       Impact factor: 10.539

Review 10.  Molecular genetics of human primary microcephaly: an overview.

Authors:  Muhammad Faheem; Muhammad Imran Naseer; Mahmood Rasool; Adeel G Chaudhary; Taha A Kumosani; Asad Muhammad Ilyas; Peter Pushparaj; Farid Ahmed; Hussain A Algahtani; Mohammad H Al-Qahtani; Hasan Saleh Jamal
Journal:  BMC Med Genomics       Date:  2015-01-15       Impact factor: 3.063

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  6 in total

1.  Next-Generation Sequencing Reveals Novel Homozygous Missense Variant c.934T > C in POLR1C Gene Causing Leukodystrophy and Hypomyelinating Disease.

Authors:  Muhammad Imran Naseer; Angham Abdulrahman Abdulkareem; Peter Natesan Pushparaj; Samah Saharti; Osama Y Muthaffar
Journal:  Front Pediatr       Date:  2022-05-24       Impact factor: 3.569

2.  Clinical whole exome sequencing revealed de novo heterozygous stop-gain and missense variants in the STXBP1 gene associated with epilepsy in Saudi families.

Authors:  Muhammad Imran Naseer; Angham Abdulrhman Abdulkareem; Mahmood Rasool; Bader Shirah; Hussein Algahtani; Osama Y Muthaffar; Peter Natesan Pushparaj
Journal:  Saudi J Biol Sci       Date:  2022-05-20       Impact factor: 4.052

3.  Whole exome sequencing identifies a novel mutation in ASPM and ultra-rare mutation in CDK5RAP2 causing Primary microcephaly in consanguineous Pakistani families.

Authors:  Ehtisham Ul Haq Makhdoom; Haseeb Anwar; Shahid Mahmood Baig; Ghulam Hussain
Journal:  Pak J Med Sci       Date:  2022 Jan-Feb       Impact factor: 1.088

4.  Whole-Exome Sequencing Reveals a Missense Variant c.1612C>T (p.Arg538Cys) in the BTD Gene Leading to Neuromyelitis Optica Spectrum Disorder in Saudi Families.

Authors:  Muhammad Imran Naseer; Peter Natesan Pushparaj; Angham Abdulrahman Abdulkareem; Osama Y Muthaffar
Journal:  Front Pediatr       Date:  2022-02-21       Impact factor: 3.418

5.  Whole-Exome Sequencing Identifies Novel SCN1A and CACNB4 Genes Mutations in the Cohort of Saudi Patients With Epilepsy.

Authors:  Muhammad Imran Naseer; Angham Abdulrhman Abdulkareem; Mahmood Rasool; Hussein Algahtani; Osama Yousef Muthaffar; Peter Natesan Pushparaj
Journal:  Front Pediatr       Date:  2022-06-22       Impact factor: 3.569

6.  Updates on Clinical and Genetic Heterogeneity of ASPM in 12 Autosomal Recessive Primary Microcephaly Families in Pakistani Population.

Authors:  Niaz Muhammad Khan; Basharat Hussain; Chenqing Zheng; Ayaz Khan; Muhammad Shareef Masoud; Qingquan Gu; Linhui Qiu; Naveed Altaf Malik; Muhammad Qasim; Muhammad Tariq; Junlei Chang
Journal:  Front Pediatr       Date:  2021-07-06       Impact factor: 3.418

  6 in total

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