| Literature DB >> 33643699 |
Catherine A Lippi1,2, Holly D Gaff3,4, Alexis L White1,2, Sadie J Ryan1,2.
Abstract
The rising prevalence of tick-borne diseases in humans in recent decades has called attention to the need for more information on geographic risk for public health planning. Species distribution models (SDMs) are an increasingly utilized method of constructing potential geographic ranges. There are many knowledge gaps in our understanding of risk of exposure to tick-borne pathogens, particularly for those in the rickettsial group. Here, we conducted a systematic scoping review of the SDM literature for rickettsial pathogens and tick vectors in the genus Amblyomma. Of the 174 reviewed articles, only 24 studies used SDMs to estimate the potential extent of vector and/or pathogen ranges. The majority of studies (79%) estimated only tick distributions using vector presence as a proxy for pathogen exposure. Studies were conducted at different scales and across multiple continents. Few studies undertook original data collection, and SDMs were mostly built with presence-only datasets from public database or surveillance sources. The reliance on existing data sources, using ticks as a proxy for disease risk, may simply reflect a lag in new data acquisition and a thorough understanding of the tick-pathogen ecology involved.Entities:
Keywords: Amblyomma; PRISMA; Rickettsia; Species distribution models
Year: 2021 PMID: 33643699 PMCID: PMC7896504 DOI: 10.7717/peerj.10596
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 3.061
List of final publications on Amblyomma ticks and rickettsial group pathogens featured in literature review.
| Vector | Pathogen | Modeling Method | Location | Environmental Data | Major Factors | Reference |
|---|---|---|---|---|---|---|
| GAM, Splines, LR | USA | N/A | Expanding range of vector correlates with increased incidence | |||
| N/A | LR,BRT,RF,MaxEnt,MARS | USA (FL) | DEM, STATSGO soil and hydrology database, FL Coop Land Cover, Daymet | Annual precipitation, Mean temperature of driest quarter, Minimum temperature of coldest month, Mean NDVI | ||
| N/A | LR | USA (FL) | WorldClim, FGDL, FL CLC, DEM | Forested areas, Precipitation seasonality | ||
| N/A | MaxEnt | USA (KS) | CliMond | Soil moisture, Temperature, Precipitation | ||
| N/A | MaxEnt | North America | WorldClim | Annual precipitation, Precipitation seasonality, Mean diurnal range, Maximum temperature of warmest month | ||
| N/A | LR | USA (MO) | University of Missouri Land-use Classification Map, Landsat5, NDVI, DEM, The Climate Source | Forested areas, Elevated relative humidity in June | ||
| N/A | BRT, GLM, MARS, MaxEnt, RF | USA | WorldClim, Daymet | Mean diurnal temperature range, Annual precipitation, Mean vapor pressure in July | ||
| N/A | MaxEnt | USA (CA) | WorldClim, PRISM | Minimum temperature of coldest month | ||
| N/A | DOMAIN | South Africa | NOAA AVHRR | Mean yearly temperature, Mean monthly max temperature, NDVI, Water vapor pressure deficit | ||
| N/A | MaxEnt, Gower distance | Africa, projected to New World | BioGeo Berkeley climate data | NDVI in June-August | ||
| N/A | MaxEnt | Zimbabwe | Climate Research Unit Time Series (CRU TS) 2.0 | Temperature, Total annual rainfall, Rainfall seasonality | ||
| N/A | CLIMEX | Zimbabwe | Climate data from published literature | N/A | ||
| N/A | WofE, ENFA | Tanzania | NOAA LandSat5 | Cattle density, Rainfall, Drought period (varied by species) | ||
| N/A | MaxEnt | Mexico and USA (TX) | WordClim, USGS DEM | Elevation, NDVI, Mean temperature (13-16 ˚C), Seasonal rainfall | ||
| N/A | ENFA, MaxEnt, GARP | Colombia | WorldClim, NDVI | Isothermality, Precipitation of driest quarter | ||
| N/A | MaxEnt | Brazil | WorldClim | Seven variables selected from literature: Annual mean temperature, Mean diurnal temperature range, Max temperature in warmest month, Min temperature in coldest month, Annual precipitation, Precipitation in wettest and driest months | ||
| N/A | MaxEnt | Central and South America | MODIS NDVI and LST | Regional differences in vegetation and temperature align with tick species | ||
| MaxEnt | Panama | WorldClim | Mean temperature of driest quarter, Elevation, Coastal shrub landcover, Forested areas, Rural areas | |||
| 10+ species of | N/A | LR | Mainland Africa | CRES climate, NDVI | Latitudinal gradient | |
| 10+ species of | N/A | LR | Mainland Africa | CRES climate, NDVI | Climate better predictor than NDVI, Minimum temperature, Maximum temperature, Rainfall | |
| 10+ species of | N/A | Multiple Regression | Global | IMAGE 2.2 climate change models | All scenarios of climate change drove increases in tick habitat | |
| N/A | BHM | USA (KS, MO, OK, AR) | National Landcover Dataset, MODIS, NASA POWER, US Census | Poverty, Average humidity, Average land surface temperature | ||
| N/A | LR | USA (MS) | MLCD, MODIS NDVI | Soil moisture, Flooding, Forest cover, NDVI | ||
| N/A | GWR | South-central and Southeastern USA | NLCD, Daymet, white-tailed deer density | Temperature, Humidity, Precipitation, Forest cover |
Note:
BHM, Bayesian Hierarchical Model; BRT, Boosted Regression Trees; ENFA, Ecological Niche Factor Analysis; GARP, Genetic Algorithm for Rule-Set Production; GLM, Generalized Linear Model; GWR, Geographically Weighted Regression; LR, Linear Regression; MARS, Multivariate Adaptive Regression Splines; RF, Random Forests.
Figure 1PRISMA flow diagram outlining the literature search and screening process.