Literature DB >> 33642704

Mathematical analysis of a stochastic model for spread of Coronavirus.

A Babaei1, H Jafari1,2,3,4, S Banihashemi1, M Ahmadi1.   

Abstract

This paper is associated to investigate a stochastic SEIAQHR model for transmission of Coronavirus disease 2019 that is a recent great crisis in numerous societies. This stochastic pandemic model is established due to several safety protocols, for instance social-distancing, mask and quarantine. Three white noises are added to three of the main parameters of the system to represent the impact of randomness in the environment on the considered model. Also, the unique solvability of the presented stochastic model is proved. Moreover, a collocation approach based on the Legendre polynomials is presented to obtain the numerical solution of this system. Finally, some simulations are provided to survey the obtained results of this pandemic model and to identify the theoretical findings.
© 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Brownian motion; COVID-19; Legendre collocation scheme; Quarantine; Reproduction number; Social distancing

Year:  2021        PMID: 33642704      PMCID: PMC7894125          DOI: 10.1016/j.chaos.2021.110788

Source DB:  PubMed          Journal:  Chaos Solitons Fractals        ISSN: 0960-0779            Impact factor:   5.944


Introduction

Using dynamical systems to describe behaviors of infectious diseases is an effective way to study how these diseases spread [1], [2], [3]. Mathematical models can greatly help researchers to better understand behaviors of deadly diseases around the world. The Susceptible-Infectious-Recovered (SIR) approach is a well-known basic model to analyze and to predict the epidemic of contagious diseases. Many researchers employed theoretical frameworks and numerical simulations to survey the manner of transmission of different infectious diseases [4], [5], [6], [7], [8], [9], [10], [11], [12], [13]. In recent months, a specific group of viruses, named Coronavirus, has disrupted life around the world. Coronaviruses have a “crown” or corona of sugary-proteins. Thus, they have named Coronaviruses according to their specific appearance, in 1960. Special cases of Coronaviruses are the main sources of certain popular diseases such as the Middle East respiratory syndrome (MERS-CoV) and severe acute respiratory syndrome (SARS-CoV). Researches have shown that these viruses are conveyed between humans and animals. For example, MERS-CoV and SARS-CoV have transmitted from dromedary camels and civets to humans, respectively. Some Coronavirus strains are only active in animals and have not yet infected human beings. The Wuhan city in China was the first place that the Coronavirus disease 2019 (COVID-19) was identified. This new version of Coronaviruses was not previously diagnosed in human beings. Experts refer to different sources for this disease. Some of them believe the virus was first transmitted from pangolins or bats to humans in China. The high rate of contagion has caused that countries all over the world are affected by COVID-19. Cough, fever, difficulties in breathing and loss of sense of taste and smell are the main signs of the disease. High mortality rate and the serious economic and financial crisis created by the Coronavirus pandemic have motivated many researchers to study the behaviors of this virus and to find effective ways for facing this outbreak. Hence, some suitable susceptible-exposed-infectious-recovered (SEIR) type models are presented in these investigations to simulate the dynamic of the COVID-19 pandemic. The impact of asymptomatic category and quarantine on the transmission of COVID-19 [14], modeling the COVID-19 due to the interactivity between the animals, humans and the infections reservoir such as seafood market [15], investigating the dynamics of COVID-19 epidemics using real data from Pakistan [16], a model for the transmission of COVID-19 based on the Caputo-Fabrizio fractional order derivative [17], a stochastic model to study the stationary distribution and extinction of coronavirus epidemic [18], a stochastic model to evaluate healthcare impact of Coronavirus in India [19], modeling the potential for mask use to curtail the COVID-19 [20], using fuzzy neural network models to predict COVID-19 time series in Mexico [21], investigation about the role of non-pharmaceutical interventions on reducing COVID-19 [22] and identifying the effect of social distancing in diminishing COVID-19 in Canada [23] are some examples of these scientific works. In this work, first, we suggest a deterministic model to analyze the impact of preventive and health-protective measures such as quarantine, using masks and social distancing on the Coronavirus prevalence. A parameter called the force of infection is considered in the model. This parameter is affected by the factors related to the mentioned safety health protocols. Thus, this novel biological parameter helps us to verify the impact of safety strategies on the control of the disease. Many relationships between people are based on random contacts. So, by considering random parameters in the proposed deterministic model, a more realistic stochastic model for COVID-19 will be derived. Also, a new high-order numerical technique is introduced to find more accurate and reliable results for the presented biological system. This paper has the following organization. In Section 2, a deterministic model for COVID-19 is presented based on some general strategies. Also, the analysis of this deterministic model will be developed. A stochastic model for the spread of Coronavirus is discussed in Section 3 and the existence of a unique positive solution for this system will be proved. In Section 4, a step-by-step collocation scheme is introduced and in Section 5, this method is employed to provide numerical simulations of the proposed stochastic model. At the end, the main conclusions are presented in Section 6.

The deterministic COVID-19 model

In the rest, the supposed population will be divided into several compartments to adapt a SEIR-type model describing the evolution of the COVID-19 pandemic. For simulation, the total size of the population under study is supposed to equal to . In the survey conducted, every individual belongs to one of the following seven categories: where the class includes susceptible individuals who never infected before; the class includes the individuals that have been newly-infected but those are not still sick and cannot transmit infection; the class includes the infectious individuals with symptoms; the class includes the infectious individuals that are not yet symptoms; the class includes the infectious individuals that are with slight symptoms and hence are at home quarantine; the class includes the infectious individuals that are hospitalized; the class includes the recovered individuals from the disease; Now, to introduce our model, we need to define some parameters. Let and show the contact and the transmission rates, respectively. represents the rate of quarantine for exposed persons. is the birth rate. To consider the effectiveness of social-distancing, the effective contact rate is defined. displays the transition rate from the symptomatic infected category to the quarantined infected category. and are the recovery rates of symptomatic infected persons and asymptomatic infected persons, respectively and is the recovery rate of individuals in the class . Also, and show the movement rate from the class to the class and the transition rate from to the class respectively. and represent the symptoms rate among infected individuals and the mortality rate due to Coronavirus, respectively. Moreover, is the proportion of people who use masks and represents the effect of using mask to prevent catching the infection by susceptible individuals. is the efficacy of quarantine and hospitalization admission in preventing virus transmission. Finally, and represent the proportion of infected individuals with symptoms in quarantine, the movement rate from the category to and the natural death rate, respectively. Let, the force of infection, be defined as: Then, according to the above variables and parameters, we have the following proposed system of equations for the dynamics of COVID-19:The diagram of this model is illustrated in Fig. 1 .
Fig. 1

The diagram of the proposed coronavirus transmission model.

The diagram of the proposed coronavirus transmission model. The disease free equilibrium point of the model (2) can be obtained asTo assess the transmissibility of the disease, it is needed to get the basic reproduction number i.e. the expected number of new infections that result from a single infectious person in a specific population of susceptible individuals. To determine this number for the COVID-19 model (2), we employ the method proposed in [24]. Suppose . The matrix of new infection terms and the matrix of the remaining transmission terms for the model (2) are defined as whereandin whichThe required is the spectral radius of the matrix . Hence, we getwhere andAlso, the endemic equilibrium point is determined by solving the systemwhere and . Sowhereand

Stochastic model

Real-world models are usually influenced by uncertain natural factors. Thus, incorporating environmental interactions helps to find a better picture of the COVID-19 pandemic in a society. So, it is more appropriate to present the model of disease by stochastic differential equations. In the rest, we improve the model (2) by considering some noisy environmental effects. To this end, the Brownian motion process will be employed to simulate randomness in data. In the spread of disease model (2), we focus on the three transmission rates and . In the environment, these parameters are not fixed but oscillate around some average values. Let some white noises be added to them aswhere are standard Brownian motions [25], [26] and are the intensities of environmental oscillations that . Now, we obtain the following stochastic model asTo investigate this improved model, first, we prove the existence of unique global positive solution for this system. Let For any initial valueand everythe system(6)have an unique solution. This solution will remain positive with probability one. The coefficients of system (6) are locally Lipschitz continuous. Hence, this system has a unique local solutionon where is the “explosion time” [25], for any initial valueNow, we show that almost surely (a.s.) and as a result the solution is global. Suppose is sufficiently large such that the initial values and lie within the interval . Letfor any andSet where shows the empty set. From this definition it can be concluded that is increasing when . Let . So, a.s. Therefore, if we can prove a.s., then a.s. and To complete the proof, it is sufficient to prove that a.s. Let this is not correct. Therefore, there exists two constants and such that . SoFor ThusConsider the twice differentiable function with the definitionSince for every hence, is nonnegative. Due to the system (6) and It’s formula on wherewhich is bounded and . Therefore, we obtainandwhere shows the mathematical expectation. LetFrom Eq. (8), we have . Moreover, for every at least one of the variables or is greater or equal to or less than or equal to . Hence, is not less than or i.e.,Then, (8) and (9) resultswhere is the usual notation for indicator of set . If thenwhich is a contradiction. So, the hypothesis is wrong and a.s. □

Exponentially stability

In this subsection, we study the stability of disease-free equilibrium for model (6). Let is the family of non-negative functions on that are twice continuously differentiable in and once in . Suppose there exists a functionsatisfying the following inequalitieswhereand. Thus, the equilibrium pointof the system(6)is exponentially-stable. Also,is exponentially stable in mean square and globally asymptotically stable, when. Supposeandand. Thus, we have Letthe disease-free equilibrium pointof the system(6)is exponentially-stable, if Considering the following Lyapunov functionwhere thenBy using Lemma 1, we have According to the assumption, we know and . Let is sufficiently small as the coefficients and be negative. Thus, from Theorem 2, is exponentially -stable. If the conditions and hold, then, in the special case the equilibrium point of system (6) will be globally asymptotically stable. □

Numerical Scheme

In this section, we describe a step-by-step collocation approach based on the Legendre polynomials to solve a system of nonlinear stochastic differential equations. [28] The recurrence formula of Legendre polynomials on interval are defined aswhere and . The shifted Legendre polynomials on are defined as We use a step-by-step approach to solve the system (6) on the interval . For this purpose, let and . Now, to find a numerical solution of the system on the subinterval we will employ a Legendre collocation method. Consider the numerical solutions as followswhere andfor . According to (6) and (10), we havewhereandAlso, from (10) Let and be the roots of . By evaluating Eqs. (11) and (12) at the collocation points a system of nonlinear algebraic equations is extracted asNote that, the part in (11) is evaluated by . This system can be solved using a numerical method, such as Newton’s iterative method. Solving this system leads to an approximate solution for (6) on the interval . In general, to find a numerical solution of (6) on the interval suppose in whichsuch thatand Similarly, by (6) and (14), we getwhere Let and be the roots of . By evaluating Eqs. (15) at this collocation points, we haveHere, is estimated by . Also, from Eq. (14) at we getSo, for each step the relations (16) and (17) give a system of nonlinear equations for the unknown coefficients . After solving this systems, the numerical solutions are computed on the interval asin which and .

Numerical results

In this section, we employ the numerical approach introduced in the previous section to illustrate the obtained results of the proposed models (2) and (6) for COVID-19. These simulations help us to investigate the dynamical behaviors of this pandemic when some safety protocols are observed and random effects are added to the model. To this end, some estimations are considered for the parameters of the model according to some published researches about this disease [22], [29], [30], [31]. These approximations are displayed in Table 1 . Also, we need some initial values for the variables of these models. So, the following initial conditions are supposed:All numerical experiments are performed using Matlab on a PC with a 1.70GHz Core i5-4210 CPU and main memory 8 GB.
Table 1

The parameters values for the considered COVID-19 models.

ParameterDescriptionValueSource
ΛBirth rateμ×N(0)[31]
βEffective contact rate0.8648[22]
cContactrate14.781[31]
θTransmission rate0.5944[30]
qThe quarantine rate1.8887×107[31]
δITransition rate from E to H0.13266[31]
γIRecovery rate of I0.33029[31]
γARecovery rate of A0.13978[31]
γHRecovery rate of H0.11624[31]
αAMovement rate from Q to A0.059[22]
αITransition rate from A to I0.078[22]
ρSymptoms rate among infected individuals0.86834[31]
cmProportion of individuals who use masks0.0546[22]
μIMortality rate due to COVID-190.01[30]
εmEfficacy of using masks to prevent catching the infection by S0.5[22]
θqEfficacy of quarantine and hospitalization1[22]
φProportion of Q with clinical symptoms0.05[29]
ρ¯Movement rate from Q to I with clinical symptoms0.1259[29]
μNaturaldeathrate1/69.5[30]
The parameters values for the considered COVID-19 models. Fig. 2 shows the endemic equilibrium and the trajectories of the solution for the case with and the case with when . Fig. 3 displays the reproduction number for several values of and with . Fig. 4 and Fig. 5 display the trajectories of solution for the stochastic model (6) with and the solution of the corresponding deterministic model along with the histograms of frequencies for and . These figures confirm that model (6) has a positive solution. Also, from the conditionsandfor in Theorem 3, we have Hence, in the case is globally asymptotically stable and in the case the disease-free equilibrium point is exponentially 3-stable.
Fig. 2

The trajectories of the solution for the cases and when .

Fig. 3

Reproduction number for several values of (up) and (down).

Fig. 4

The trajectories of solution for the stochastic model (6) and the solution of the corresponding deterministic model (left) along with the histograms of frequencies for the populations and (right).

Fig. 5

The trajectories of solution for the stochastic model (6) and the solution of the corresponding deterministic model (left) along with the histograms of frequencies for the populations and (right).

The trajectories of the solution for the cases and when . Reproduction number for several values of (up) and (down). The trajectories of solution for the stochastic model (6) and the solution of the corresponding deterministic model (left) along with the histograms of frequencies for the populations and (right). The trajectories of solution for the stochastic model (6) and the solution of the corresponding deterministic model (left) along with the histograms of frequencies for the populations and (right). Fig. 6 shows the trajectories of and for the stochastic model when and the deterministic model, for several values of . Fig. 7 displays the trajectories of and for the stochastic model with and the deterministic model, with different values of . Also, Fig. 8 indicates the trajectories of and for the deterministic model and the stochastic model with for different values of .
Fig. 6

Graphs of trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of .

Fig. 7

The trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of .

Fig. 8

The trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of .

Graphs of trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of . The trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of . The trajectories of and for the stochastic model (left) and the deterministic model (right) with different values of .

Conclusion

A stochastic model based on some health protocols such as quarantine, social distancing and wearing masks has outlined to describe the trend of COVID-19 pandemic in a population. The existence and uniqueness of a positive global solution for the proposed model were proved. Stability analysis of the stochastic model and its special deterministic case have been discussed. In order to simulate the dynamical behaviors of the model, a step-by-step collocation method based on the Legendre polynomials was introduced. Based on the numerical result , it can be seen that considering random effects for the parameters of the model helps to depict a more realistic aspect of the disease development. Also, these results confirm that preventative actions and health strategies have a direct effect on the virus prevalence and control of the pandemic. Considering more public health strategies in the model and studying the impact of underlying diseases or other viral epidemics such as influenza, on the spread of Coronavirus, are some research directions that can be investigated for future works. Also, verifying the frequency of the disease among different age groups may be another useful subject.

CRediT authorship contribution statement

A. Babaei: Supervision, Software, Validation, Writing - review & editing. H. Jafari: Supervision, Writing - review & editing, Investigation. S. Banihashemi: Writing - review & editing, Methodology, Validation, Software. M. Ahmadi: Methodology, Validation, Software.

Declaration of Competing Interest

The authors declare no potential conflict of interests.
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