| Literature DB >> 33642697 |
Jie Yang1, Sanyi Tang1, Robert A Cheke2.
Abstract
By March 2020, China and Singapore had achieved remarkable results in the prevention and control of COVID-19, but in April Singapore's outbreak began to deteriorate, while China's remained controlled. Using detailed data from Tianjin, China, and Singapore, a stochastic discrete COVID-19 epidemic model was constructed to depict the impact of the epidemic. Parameter estimation and sensitivity analysis were developed to study the probability of imported cases inducing an outbreak in relation to different prevention and control efforts. Results show that the resumption of work and the re-opening of schools will not lead to an outbreak if the effective reproduction number is lower than 1 and approaches 0 and tracking quarantine measures are strengthened. Once an outbreak occurs, if close contacts can be tracked and quarantined in time, the outbreak will be contained. If work is resumed and schools are re-opened with the effective reproduction number greater than 1, then it is more likely that a secondary outbreak will be generated. Also, the greater the number of undetected foreign imported cases and the weaker the prevention and control measures, the more serious the epidemic. Therefore, the key to prevention of a second outbreak is to return to work and to re-open schools only after the effective reproduction number is less than 1 for a period, and when tracking quarantine measures have been strengthened. Our model provides a qualitative and quantitative basis for decision-making for the prevention and control of COVID-19 epidemics and the prediction, early warning and risk assessment of secondary outbreaks.Entities:
Keywords: COVID-19; Effective reproduction number; Secondary outbreak; Stochastic discrete model; Tracking quarantine measures
Year: 2021 PMID: 33642697 PMCID: PMC7897556 DOI: 10.1007/s11071-021-06294-6
Source DB: PubMed Journal: Nonlinear Dyn ISSN: 0924-090X Impact factor: 5.022
Fig. 1Data sets for Tianjin from 11 January to 17 March 2020 and for Singapore from 18 January to 17 March 2020. In A4 and B4, = daily numbers of imported exposed cases; = daily numbers of imported infectious cases with symptoms; = daily numbers of imported quarantined exposed cases; = daily numbers of imported hospitalized cases
Fig. 2Diagram of the model adopted in the study for simulating the COVID-19 infection
Initial conditions and parameter values for model (1)
| Initial conditions | Description | Value | Reference | ||
|---|---|---|---|---|---|
| Tianjin | Singapore | ||||
| Initial susceptible population | [ | ||||
| Initial exposed population | 5 | 6 | Fitting | ||
| Initial infected population with symptoms | 0 | 0 | Data | ||
| Initial infected population but asymptomatic | 0 | 0 | Data | ||
| Initial quarantined susceptible population | 0 | 0 | Data | ||
| Initial quarantined exposed population | 0 | 0 | Data | ||
| Initial hospitalized population | 0 | 0 | Data | ||
| Initial recovered population | 0 | 0 | Data | ||
Fig. 3Model fitting for the daily number of quarantined exposed, infectious with symptoms and hospitalized cases in Tianjin (A1–A3) and Singapore (B1–B3)
Fig. 4The effective reproduction number R(t) in Tianjin during the period 11 January to 17 March 2020 (a) and for Singapore from 18 January to 16 March 2020 (b)
Fig. 5The effects of foreign imported cases and lifting the prevention and control measures on the possibility of a secondary outbreak of COVID-19 in Tianjin. A1–A3 The hospitalized cases based on fully lifting the prevention and control measures about c with all combinations of k and and the corresponding c(t). B1–B3 The hospitalized cases based on both fully lifting the prevention and control measures about c and with all combinations of k and and the corresponding . C1–C3 The hospitalized cases based on both fully lifting the prevention and control measures about c and and 50% lifting the prevention and control measures about q with all combinations of k and and the corresponding q(t)
Fig. 6Impacts of lifting the prevention and control measures about q on a potential secondary outbreak of COVID-19 with and in Tianjin
Fig. 7The effects of foreign imported cases and lifting the prevention and control measures about q on a potential secondary outbreak of COVID-19 in Tianjin. The hospitalized cases based on both fully lifting the prevention and control measures about c and , and 60% (A1–A3), 80% (B1–B3) and fully (C1–C3) lifting the prevention and control measures about q with all combinations of k and and the corresponding q(t)
The risk of a secondary outbreak of COVID-19 under different proportions of undetected infections amongst foreign imported cases and different rates of lifting the prevention and control measures about q in Tianjin
| Combinations | Peak value or the hospitalized cases on 1 October 2020 | |||
|---|---|---|---|---|
| Rate of lifting the prevention and control measures | Proportion of undetected of the imported cases | 60% lifting the prevention and control measures about | 80% lifting the prevention and control measures about | Fully lifting the prevention and control measures about |
| 43(1 October) | 17277(1 October) | 249675(21 August) | ||
| no outbreak | 13290(1 October) | 250148(30 August) | ||
| no outbreak | 11448(1 October) | 250150(9 September) | ||
| no outbreak | no outbreak | no outbreak | ||
| no outbreak | 112(1 October) | 4740(1 October) | ||
| no outbreak | 64(1 October) | 2657(1 October) | ||
| no outbreak | 26(1 October) | 1990(1 October) | ||
| no outbreak | no outbreak | no outbreak | ||
| no outbreak | no outbreak | no outbreak | ||
| no outbreak | no outbreak | no outbreak | ||
| no outbreak | no outbreak | no outbreak | ||
| no outbreak | no outbreak | no outbreak | ||
Fig. 8Impact of the quarantined rate on the secondary outbreak of COVID-19 in Tianjin. The hospitalized cases based on both fully lifting the prevention and control measures about c and with from 18 March to 8 June and on q (decreased from 18 March to May 10 and directly increased to 0.5 after 10 May) and the corresponding q(t)
Fig. 9Impact of foreign imported cases and lifting the prevention and control measures on the possibility of a secondary outbreak of COVID-19 in Singapore. A1–A3 The hospitalized cases based on contact number increased by 100% with all combinations of k and and the corresponding c(t). B1–B3 The hospitalized cases based on both contact number and transmission probability increased by 100% with all combinations of k and and the corresponding . C1–C3 The hospitalized cases based on both contact number and transmission probability increased by 100% and quarantined rate contraction by 50% with all combinations of k and and the corresponding q(t)
The risk of a secondary outbreak of COVID-19 under different proportions of undetected foreign imported cases and different rates of lifting the prevention and control measures in Singapore
| Combinations | Peak value or the hospitalized cases on 1 October 2020 | |||
|---|---|---|---|---|
| Rate of lifting the prevention and control measures | Proportion of undetected of the imported cases | Contact number increased by 100% | Both contact number and transmission probability increased by 100% | Both contact number and transmission probability increased by 100% and quarantined rate contraction by 50% |
| 54490(1 June) | 169043(5 May) | 219091(3 May) | ||
| 54898(5 June) | 169001(5 May) | 220175(5 May) | ||
| 54735(9 June) | 170101(8 May) | 220332(7 May) | ||
| 54251(16 June) | 170687(9 May) | 220352(7 May) | ||
| 45833(29 June) | 124961(9 May) | 154457(29 May) | ||
| 46535(30 June) | 125518(30 May) | 157371(30 May) | ||
| 47412(5 July) | 127538(1 June) | 154689(28 May) | ||
| 48244(13 July) | 129494(4 June) | 156609(30 May) | ||
| 1305(1 October) | 1193(1 October) | 1552(1 October) | ||
| 1211(1 October) | 822(1 October) | 841(1 October) | ||
| 758(1 October) | 593(1 October) | 706(1 October) | ||
| 590(1 October) | 548(1 October) | 390(1 October) | ||
Fig. 10Impacts of increasing the contact number on a potential secondary outbreak of COVID-19 with and in Singapore
Fig. 11a The estimated and real numbers of hospitalized individuals in Singapore from 18 January to 12 June 2020. b–e The corresponding trends for c(t), , q(t) and R(t)