Literature DB >> 33634272

Joint Modeling of Chest Radiographs and Radiology Reports for Pulmonary Edema Assessment.

Geeticka Chauhan1, Ruizhi Liao1, William Wells1,2, Jacob Andreas1, Xin Wang3, Seth Berkowitz4, Steven Horng4, Peter Szolovits1, Polina Golland1.   

Abstract

We propose and demonstrate a novel machine learning algorithm that assesses pulmonary edema severity from chest radiographs. While large publicly available datasets of chest radiographs and free-text radiology reports exist, only limited numerical edema severity labels can be extracted from radiology reports. This is a significant challenge in learning such models for image classification. To take advantage of the rich information present in the radiology reports, we develop a neural network model that is trained on both images and free-text to assess pulmonary edema severity from chest radiographs at inference time. Our experimental results suggest that the joint image-text representation learning improves the performance of pulmonary edema assessment compared to a supervised model trained on images only. We also show the use of the text for explaining the image classification by the joint model. To the best of our knowledge, our approach is the first to leverage free-text radiology reports for improving the image model performance in this application. Our code is available at: https://github.com/RayRuizhiLiao/joint_chestxray.

Entities:  

Year:  2020        PMID: 33634272      PMCID: PMC7901713          DOI: 10.1007/978-3-030-59713-9_51

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  6 in total

1.  PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals.

Authors:  A L Goldberger; L A Amaral; L Glass; J M Hausdorff; P C Ivanov; R G Mark; J E Mietus; G B Moody; C K Peng; H E Stanley
Journal:  Circulation       Date:  2000-06-13       Impact factor: 29.690

2.  A simple algorithm for identifying negated findings and diseases in discharge summaries.

Authors:  W W Chapman; W Bridewell; P Hanbury; G F Cooper; B G Buchanan
Journal:  J Biomed Inform       Date:  2001-10       Impact factor: 6.317

3.  2009 Focused update incorporated into the ACC/AHA 2005 Guidelines for the Diagnosis and Management of Heart Failure in Adults A Report of the American College of Cardiology Foundation/American Heart Association Task Force on Practice Guidelines Developed in Collaboration With the International Society for Heart and Lung Transplantation.

Authors:  Sharon Ann Hunt; William T Abraham; Marshall H Chin; Arthur M Feldman; Gary S Francis; Theodore G Ganiats; Mariell Jessup; Marvin A Konstam; Donna M Mancini; Keith Michl; John A Oates; Peter S Rahko; Marc A Silver; Lynne Warner Stevenson; Clyde W Yancy
Journal:  J Am Coll Cardiol       Date:  2009-04-14       Impact factor: 24.094

Review 4.  Assessing and grading congestion in acute heart failure: a scientific statement from the acute heart failure committee of the heart failure association of the European Society of Cardiology and endorsed by the European Society of Intensive Care Medicine.

Authors:  Mihai Gheorghiade; Ferenc Follath; Piotr Ponikowski; Jeffrey H Barsuk; John E A Blair; John G Cleland; Kenneth Dickstein; Mark H Drazner; Gregg C Fonarow; Tiny Jaarsma; Guillaume Jondeau; Jose Lopez Sendon; Alexander Mebazaa; Marco Metra; Markku Nieminen; Peter S Pang; Petar Seferovic; Lynne W Stevenson; Dirk J van Veldhuisen; Faiez Zannad; Stefan D Anker; Andrew Rhodes; John J V McMurray; Gerasimos Filippatos
Journal:  Eur J Heart Fail       Date:  2010-03-30       Impact factor: 15.534

5.  Characteristics and outcomes of patients hospitalized for heart failure in the United States: rationale, design, and preliminary observations from the first 100,000 cases in the Acute Decompensated Heart Failure National Registry (ADHERE).

Authors:  Kirkwood F Adams; Gregg C Fonarow; Charles L Emerman; Thierry H LeJemtel; Maria Rosa Costanzo; William T Abraham; Robert L Berkowitz; Marie Galvao; Darlene P Horton
Journal:  Am Heart J       Date:  2005-02       Impact factor: 4.749

6.  MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports.

Authors:  Alistair E W Johnson; Tom J Pollard; Seth J Berkowitz; Nathaniel R Greenbaum; Matthew P Lungren; Chih-Ying Deng; Roger G Mark; Steven Horng
Journal:  Sci Data       Date:  2019-12-12       Impact factor: 6.444

  6 in total
  2 in total

1.  Improving Joint Learning of Chest X-Ray and Radiology Report by Word Region Alignment.

Authors:  Zhanghexuan Ji; Mohammad Abuzar Shaikh; Dana Moukheiber; Sargur N Srihari; Yifan Peng; Mingchen Gao
Journal:  Mach Learn Med Imaging       Date:  2021-09-21

2.  Event-Based Clinical Finding Extraction from Radiology Reports with Pre-trained Language Model.

Authors:  Wilson Lau; Kevin Lybarger; Martin L Gunn; Meliha Yetisgen
Journal:  J Digit Imaging       Date:  2022-10-17       Impact factor: 4.903

  2 in total

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