Literature DB >> 33633197

Deep learning identification for citizen science surveillance of tiger mosquitoes.

Balint Armin Pataki1, Joan Garriga2, Roger Eritja3, John R B Palmer4, Frederic Bartumeus2,3,5, Istvan Csabai6.   

Abstract

Global monitoring of disease vectors is undoubtedly becoming an urgent need as the human population rises and becomes increasingly mobile, international commercial exchanges increase, and climate change expands the habitats of many vector species. Traditional surveillance of mosquitoes, vectors of many diseases, relies on catches, which requires regular manual inspection and reporting, and dedicated personnel, making large-scale monitoring difficult and expensive. New approaches are solving the problem of scalability by relying on smartphones and the Internet to enable novel community-based and digital observatories, where people can upload pictures of mosquitoes whenever they encounter them. An example is the Mosquito Alert citizen science system, which includes a dedicated mobile phone app through which geotagged images are collected. This system provides a viable option for monitoring the spread of various mosquito species across the globe, although it is partly limited by the quality of the citizen scientists' photos. To make the system useful for public health agencies, and to give feedback to the volunteering citizens, the submitted images are inspected and labeled by entomology experts. Although citizen-based data collection can greatly broaden disease-vector monitoring scales, manual inspection of each image is not an easily scalable option in the long run, and the system could be improved through automation. Based on Mosquito Alert's curated database of expert-validated mosquito photos, we trained a deep learning model to find tiger mosquitoes (Aedes albopictus), a species that is responsible for spreading chikungunya, dengue, and Zika among other diseases. The highly accurate 0.96 area under the receiver operating characteristic curve score promises not only a helpful pre-selector for the expert validation process but also an automated classifier giving quick feedback to the app participants, which may help to keep them motivated. In the paper, we also explored the possibilities of using the model to improve future data collection quality as a feedback loop.

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Year:  2021        PMID: 33633197      PMCID: PMC7907246          DOI: 10.1038/s41598-021-83657-4

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  24 in total

Review 1.  Chikungunya virus and the global spread of a mosquito-borne disease.

Authors:  Scott C Weaver; Marc Lecuit
Journal:  N Engl J Med       Date:  2015-03-26       Impact factor: 91.245

Review 2.  The effect of global change on mosquito-borne disease.

Authors:  Lydia H V Franklinos; Kate E Jones; David W Redding; Ibrahim Abubakar
Journal:  Lancet Infect Dis       Date:  2019-06-18       Impact factor: 25.071

Review 3.  Mosquito Saliva: The Hope for a Universal Arbovirus Vaccine?

Authors:  Jessica E Manning; David M Morens; Shaden Kamhawi; Jesus G Valenzuela; Matthew Memoli
Journal:  J Infect Dis       Date:  2018-06-05       Impact factor: 5.226

4.  Approaches to passive mosquito surveillance in the EU.

Authors:  Helge Kampen; Jolyon M Medlock; Alexander G C Vaux; Constantianus J M Koenraadt; Arnold J H van Vliet; Frederic Bartumeus; Aitana Oltra; Carla A Sousa; Sébastien Chouin; Doreen Werner
Journal:  Parasit Vectors       Date:  2015-01-08       Impact factor: 3.876

Review 5.  Chikungunya: epidemiology.

Authors:  Lyle R Petersen; Ann M Powers
Journal:  F1000Res       Date:  2016-01-19

Review 6.  Integrated Aedes management for the control of Aedes-borne diseases.

Authors:  David Roiz; Anne L Wilson; Thomas W Scott; Dina M Fonseca; Frédéric Jourdain; Pie Müller; Raman Velayudhan; Vincent Corbel
Journal:  PLoS Negl Trop Dis       Date:  2018-12-06

7.  First detection of Aedes japonicus in Spain: an unexpected finding triggered by citizen science.

Authors:  Roger Eritja; Ignacio Ruiz-Arrondo; Sarah Delacour-Estrella; Francis Schaffner; Jorge Álvarez-Chachero; Mikel Bengoa; María-Ángeles Puig; Rosario Melero-Alcíbar; Aitana Oltra; Frederic Bartumeus
Journal:  Parasit Vectors       Date:  2019-01-23       Impact factor: 3.876

8.  A Deep Learning-Based Automatic Mosquito Sensing and Control System for Urban Mosquito Habitats.

Authors:  Kyukwang Kim; Jieum Hyun; Hyeongkeun Kim; Hwijoon Lim; Hyun Myung
Journal:  Sensors (Basel)       Date:  2019-06-21       Impact factor: 3.576

9.  The current and future global distribution and population at risk of dengue.

Authors:  Jane P Messina; Oliver J Brady; Nick Golding; Moritz U G Kraemer; G R William Wint; Sarah E Ray; David M Pigott; Freya M Shearer; Kimberly Johnson; Lucas Earl; Laurie B Marczak; Shreya Shirude; Nicole Davis Weaver; Marius Gilbert; Raman Velayudhan; Peter Jones; Thomas Jaenisch; Thomas W Scott; Robert C Reiner; Simon I Hay
Journal:  Nat Microbiol       Date:  2019-06-10       Impact factor: 17.745

10.  Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks.

Authors:  Junyoung Park; Dong In Kim; Byoungjo Choi; Woochul Kang; Hyung Wook Kwon
Journal:  Sci Rep       Date:  2020-01-23       Impact factor: 4.379

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  4 in total

1.  Sensing and making sense of tourism flows and urban data to foster sustainability awareness: a real-world experience.

Authors:  Catia Prandi; Valentina Nisi; Miguel Ribeiro; Nuno Nunes
Journal:  J Big Data       Date:  2021-03-24

Review 2.  Empowering local communities using artificial intelligence.

Authors:  Yen-Chia Hsu; Ting-Hao 'Kenneth' Huang; Himanshu Verma; Andrea Mauri; Illah Nourbakhsh; Alessandro Bozzon
Journal:  Patterns (N Y)       Date:  2022-03-11

Review 3.  All for One Health and One Health for All: Considerations for Successful Citizen Science Projects Conducting Vector Surveillance from Animal Hosts.

Authors:  Karen C Poh; Jesse R Evans; Michael J Skvarla; Erika T Machtinger
Journal:  Insects       Date:  2022-05-24       Impact factor: 3.139

4.  Integrating Global Citizen Science Platforms to Enable Next-Generation Surveillance of Invasive and Vector Mosquitoes.

Authors:  Ryan M Carney; Connor Mapes; Russanne D Low; Alex Long; Anne Bowser; David Durieux; Karlene Rivera; Berj Dekramanjian; Frederic Bartumeus; Daniel Guerrero; Carrie E Seltzer; Farhat Azam; Sriram Chellappan; John R B Palmer
Journal:  Insects       Date:  2022-07-27       Impact factor: 3.139

  4 in total

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