Literature DB >> 33631125

Re-defining synthetic lethality by phenotypic profiling for precision oncology.

Yevhen Akimov1, Tero Aittokallio2.   

Abstract

High-throughput functional and genomic screening techniques provide systematic means for phenotypic discovery. Using synthetic lethality (SL) as a paradigm for anticancer drug and target discovery, we describe how these screening technologies may offer new possibilities to identify therapeutically relevant and selective SL interactions by addressing some of the challenges that have made robust discovery of SL candidates difficult. We further introduce an extended concept of SL interaction, in which a simultaneous perturbation of two or more cellular components reduces cell viability more than expected by their individual effects, which we feel is highly befitting for anticancer applications. We also highlight the potential benefits and challenges related to computational quantification of synergistic interactions and cancer selectivity. Finally, we explore how tumoral heterogeneity can be exploited to find phenotype-specific SL interactions for precision oncology using high-throughput functional screening and the exciting opportunities these methods provide for the identification of subclonal SL interactions.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CRISPR screening; drug combinations; phenotypic screening; precision oncology; synergistic interactions; synthetic lethality

Year:  2021        PMID: 33631125     DOI: 10.1016/j.chembiol.2021.01.026

Source DB:  PubMed          Journal:  Cell Chem Biol        ISSN: 2451-9448            Impact factor:   8.116


  4 in total

Review 1.  Computational methods, databases and tools for synthetic lethality prediction.

Authors:  Jing Wang; Qinglong Zhang; Junshan Han; Yanpeng Zhao; Caiyun Zhao; Bowei Yan; Chong Dai; Lianlian Wu; Yuqi Wen; Yixin Zhang; Dongjin Leng; Zhongming Wang; Xiaoxi Yang; Song He; Xiaochen Bo
Journal:  Brief Bioinform       Date:  2022-05-13       Impact factor: 13.994

Review 2.  Recent Advances in Synergistic Antitumor Effects Exploited from the Inhibition of Ataxia Telangiectasia and RAD3-Related Protein Kinase (ATR).

Authors:  Li-Wei Wang; Songwei Jiang; Ying-Hui Yuan; Jilong Duan; Nian-Dong Mao; Zi Hui; Renren Bai; Tian Xie; Xiang-Yang Ye
Journal:  Molecules       Date:  2022-04-12       Impact factor: 4.927

3.  Apoptolidin family glycomacrolides target leukemia through inhibition of ATP synthase.

Authors:  Benjamin J Reisman; Hui Guo; Haley E Ramsey; Madison T Wright; Bradley I Reinfeld; P Brent Ferrell; Gary A Sulikowski; W Kimryn Rathmell; Michael R Savona; Lars Plate; John L Rubinstein; Brian O Bachmann
Journal:  Nat Chem Biol       Date:  2021-12-02       Impact factor: 16.174

Review 4.  Development of targeted therapy of NRF2high esophageal squamous cell carcinoma.

Authors:  Chorlada Paiboonrungruang; Emily Simpson; Zhaohui Xiong; Caizhi Huang; Jianying Li; Yahui Li; Xiaoxin Chen
Journal:  Cell Signal       Date:  2021-08-04       Impact factor: 4.850

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.