Literature DB >> 33630852

Fully automated point-of-care differential diagnosis of acute febrile illness.

Sebastian Hin1, Benjamin Lopez-Jimena2,3, Mohammed Bakheit4, Vanessa Klein1, Seamus Stack3, Cheikh Fall5, Amadou Sall5, Khalid Enan6, Mohamed Mustafa6, Liz Gillies3, Viorel Rusu7, Sven Goethel7, Nils Paust1,8, Roland Zengerle1,8, Sieghard Frischmann4, Manfred Weidmann2, Konstantinos Mitsakakis1,8.   

Abstract

BACKGROUND: In this work, a platform was developed and tested to allow to detect a variety of candidate viral, bacterial and parasitic pathogens, for acute fever of unknown origin. The platform is based on a centrifugal microfluidic cartridge, the LabDisk ("FeverDisk" for the specific application), which integrates all necessary reagents for sample-to-answer analysis and is processed by a compact, point-of-care compatible device. METHODOLOGY/PRINCIPAL
FINDINGS: A sample volume of 200 μL per FeverDisk was used. In situ extraction with pre-stored reagents was achieved by bind-wash-elute chemistry and magnetic particles. Enzymes for the loop-mediated isothermal amplification (LAMP) were pre-stored in lyopellet form providing stability and independence from the cold chain. The total time to result from sample inlet to read out was 2 h. The proof-of-principle was demonstrated in three small-scale feasibility studies: in Dakar, Senegal and Khartoum, Sudan we tested biobanked samples using 29 and 9 disks, respectively; in Reinfeld, Germany we tested spiked samples and analyzed the limit of detection using three bacteria simultaneously spiked in whole blood using 15 disks. Overall during the three studies, the FeverDisk detected dengue virus (different serotypes), chikungunya virus, Plasmodium falciparum, Salmonella enterica Typhi, Salmonella enterica Paratyphi A and Streptococcus pneumoniae.
CONCLUSIONS/SIGNIFICANCE: The FeverDisk proved to be universally applicable as it successfully detected all different types of pathogens as single or co-infections, while it also managed to define the serotype of un-serotyped dengue samples. Thirty-eight FeverDisks at the two African sites provided 59 assay results, out of which 51 (86.4%) were confirmed with reference assay results. The results provide a promising outlook for future implementation of the platform in larger prospective clinical studies for defining its clinical sensitivity and specificity. The technology aims to provide multi-target diagnosis of the origins of fever, which will help fight lethal diseases and the incessant rise of antimicrobial resistance.

Entities:  

Year:  2021        PMID: 33630852      PMCID: PMC7906357          DOI: 10.1371/journal.pntd.0009177

Source DB:  PubMed          Journal:  PLoS Negl Trop Dis        ISSN: 1935-2727


  49 in total

Review 1.  Centrifugal microfluidics for biomedical applications.

Authors:  Robert Gorkin; Jiwoon Park; Jonathan Siegrist; Mary Amasia; Beom Seok Lee; Jong-Myeon Park; Jintae Kim; Hanshin Kim; Marc Madou; Yoon-Kyoung Cho
Journal:  Lab Chip       Date:  2010-05-28       Impact factor: 6.799

2.  Centrifugo-dynamic inward pumping of liquids on a centrifugal microfluidic platform.

Authors:  Steffen Zehnle; Frank Schwemmer; Günter Roth; Felix von Stetten; Roland Zengerle; Nils Paust
Journal:  Lab Chip       Date:  2012-12-21       Impact factor: 6.799

3.  Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products.

Authors:  Norihiro Tomita; Yasuyoshi Mori; Hidetoshi Kanda; Tsugunori Notomi
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

4.  A dry-format field-deployable quantitative reverse transcriptase-polymerase chain reaction assay for diagnosis of dengue infections.

Authors:  Shuenn-Jue Wu; Subhamoy Pal; Sajeewane Ekanayake; David Greenwald; Silvia Lara; Kanakatte Raviprakash; Tadeusz Kochel; Kevin Porter; Curtis Hayes; William Nelson; Johnny Callahan
Journal:  Am J Trop Med Hyg       Date:  2008-10       Impact factor: 2.345

5.  Evaluation of two IgM rapid immunochromatographic tests during circulation of Asian lineage Chikungunya virus.

Authors:  Herman Kosasih; Susana Widjaja; Edwin Surya; Sri H Hadiwijaya; Deni P R Butarbutar; Ungke A Jaya; Bachti Alisjahbana; Maya Williams
Journal:  Southeast Asian J Trop Med Public Health       Date:  2012-01       Impact factor: 0.267

6.  Rapid molecular assays for the detection of yellow fever virus in low-resource settings.

Authors:  Camille Escadafal; Oumar Faye; Amadou Alpha Sall; Ousmane Faye; Manfred Weidmann; Oliver Strohmeier; Felix von Stetten; Josef Drexler; Michael Eberhard; Matthias Niedrig; Pranav Patel
Journal:  PLoS Negl Trop Dis       Date:  2014-03-06

7.  Impact of simultaneous exposure to arboviruses on infection and transmission by Aedes aegypti mosquitoes.

Authors:  Claudia Rückert; James Weger-Lucarelli; Selene M Garcia-Luna; Michael C Young; Alex D Byas; Reyes A Murrieta; Joseph R Fauver; Gregory D Ebel
Journal:  Nat Commun       Date:  2017-05-19       Impact factor: 14.919

Review 8.  Converging Human and Malaria Vector Diagnostics with Data Management towards an Integrated Holistic One Health Approach.

Authors:  Konstantinos Mitsakakis; Sebastian Hin; Pie Müller; Nadja Wipf; Edward Thomsen; Michael Coleman; Roland Zengerle; John Vontas; Konstantinos Mavridis
Journal:  Int J Environ Res Public Health       Date:  2018-02-03       Impact factor: 3.390

9.  Etiology of severe non-malaria febrile illness in Northern Tanzania: a prospective cohort study.

Authors:  John A Crump; Anne B Morrissey; William L Nicholson; Robert F Massung; Robyn A Stoddard; Renee L Galloway; Eng Eong Ooi; Venance P Maro; Wilbrod Saganda; Grace D Kinabo; Charles Muiruri; John A Bartlett
Journal:  PLoS Negl Trop Dis       Date:  2013-07-18

10.  Loop-mediated isothermal amplification (LAMP) shield for Arduino DNA detection.

Authors:  Aldrik H Velders; Cor Schoen; Vittorio Saggiomo
Journal:  BMC Res Notes       Date:  2018-02-01
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  3 in total

1.  Clinical evaluation of the BioFire Global Fever Panel for the identification of malaria, leptospirosis, chikungunya, and dengue from whole blood: a prospective, multicentre, cross-sectional diagnostic accuracy study.

Authors:  Yukari C Manabe; Joshua Betz; Olivia Jackson; Victor Asoala; Isabel Bazan; Paul W Blair; Aileen Chang; Sarunyou Chusri; John A Crump; Kimberly A Edgel; Dennis J Faix; Stefan Fernandez; Anne T Fox; Jose A Garcia; Max Grogl; Erin A Hansen; Vireak Heang; Stacey L House; Krisada Jongsakul; Michael B Kaburise; Chonticha Klungthong; Mohammed Lamorde; Andrew G Letizia; Ivette Lorenzana; Malen Luy; Vanance P Maro; Christopher N Mores; Christopher A Myers; Abraham R Oduro; Leda Parham; Abigail J Porzucek; Michael Prouty; David S Rabiger; Matthew P Rubach; Crystyan Siles; Maria Silva; Chinaka Ukachu; John N Waitumbi; Cynthia L Phillips; Brian W Jones
Journal:  Lancet Infect Dis       Date:  2022-06-15       Impact factor: 71.421

2.  ImmunoDisk-A Fully Automated Bead-Based Immunoassay Cartridge with All Reagents Pre-Stored.

Authors:  Benita Johannsen; Desirée Baumgartner; Lena Karkossa; Nils Paust; Michal Karpíšek; Nagihan Bostanci; Roland Zengerle; Konstantinos Mitsakakis
Journal:  Biosensors (Basel)       Date:  2022-06-14

3.  OralDisk: A Chair-Side Compatible Molecular Platform Using Whole Saliva for Monitoring Oral Health at the Dental Practice.

Authors:  Desirée Baumgartner; Benita Johannsen; Mara Specht; Jan Lüddecke; Markus Rombach; Sebastian Hin; Nils Paust; Felix von Stetten; Roland Zengerle; Christopher Herz; Johannes R Peham; Pune N Paqué; Thomas Attin; Joël S Jenzer; Philipp Körner; Patrick R Schmidlin; Thomas Thurnheer; Florian J Wegehaupt; Wendy E Kaman; Andrew Stubbs; John P Hays; Viorel Rusu; Alex Michie; Thomas Binsl; David Stejskal; Michal Karpíšek; Kai Bao; Nagihan Bostanci; Georgios N Belibasakis; Konstantinos Mitsakakis
Journal:  Biosensors (Basel)       Date:  2021-10-28
  3 in total

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