Literature DB >> 33630074

Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction.

Mukhtar Sadykov1, Tobias Mourier1, Qingtian Guan1, Arnab Pain1,2,3.   

Abstract

Entities:  

Keywords:  genome biology; genome evolution; virus evolution; virus‒host interaction

Year:  2021        PMID： 33630074      PMCID： PMC7928816          DOI： 10.1093/jmcb/mjab011

Source DB:  PubMed          Journal:  J Mol Cell Biol        ISSN： 1759-4685            Impact factor:   6.216


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  8 in total

1.  The Heterogeneous Landscape and Early Evolution of Pathogen-Associated CpG Dinucleotides in SARS-CoV-2.

Authors:  Andrea Di Gioacchino; Petr Šulc; Anastassia V Komarova; Benjamin D Greenbaum; Rémi Monasson; Simona Cocco
Journal:  Mol Biol Evol       Date:  2021-05-19       Impact factor: 16.240

Review 2.  Host-directed editing of the SARS-CoV-2 genome.

Authors:  Tobias Mourier; Mukhtar Sadykov; Michael J Carr; Gabriel Gonzalez; William W Hall; Arnab Pain
Journal:  Biochem Biophys Res Commun       Date:  2020-11-05       Impact factor: 3.575

3.  The Roles of APOBEC-mediated RNA Editing in SARS-CoV-2 Mutations, Replication and Fitness.

Authors:  Kyumin Kim; Peter Calabrese; Shanshan Wang; Chao Qin; Youliang Rao; Pinghui Feng; Xiaojiang S Chen
Journal:  bioRxiv       Date:  2022-04-07

Review 4.  NAD+-consuming enzymes in immune defense against viral infection.

Authors:  Jialin Shang; Michael R Smith; Ananya Anmangandla; Hening Lin
Journal:  Biochem J       Date:  2021-12-10       Impact factor: 3.857

5.  Statistical modeling of SARS-CoV-2 substitution processes: predicting the next variant.

Authors:  Keren Levinstein Hallak; Saharon Rosset
Journal:  Commun Biol       Date:  2022-03-29

6.  The Roles of APOBEC-mediated RNA Editing in SARS-CoV-2 Mutations, Replication and Fitness.

Authors:  Kyumin Kim; Peter Calabrese; Shanshan Wang; Chao Qin; Youliang Rao; Pinghui Feng; Xiaojiang S Chen
Journal:  Res Sq       Date:  2022-04-12

7.  The roles of APOBEC-mediated RNA editing in SARS-CoV-2 mutations, replication and fitness.

Authors:  Kyumin Kim; Peter Calabrese; Shanshan Wang; Chao Qin; Youliang Rao; Pinghui Feng; Xiaojiang S Chen
Journal:  Sci Rep       Date:  2022-09-13       Impact factor: 4.996

8.  Commentary on "Poor evidence for host-dependent regular RNA editing in the transcriptome of SARS-CoV-2".

Authors:  F Martignano; S Di Giorgio; G Mattiuz; S G Conticello
Journal:  J Appl Genet       Date:  2022-03-12       Impact factor: 2.653
  8 in total

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