Literature DB >> 33622792

Intracellular pathways for lignin catabolism in white-rot fungi.

Carlos Del Cerro1, Erika Erickson1, Tao Dong1, Allison R Wong2, Elizabeth K Eder2, Samuel O Purvine2, Hugh D Mitchell2, Karl K Weitz2, Lye Meng Markillie2, Meagan C Burnet2, David W Hoyt2, Rosalie K Chu2, Jan-Fang Cheng3, Kelsey J Ramirez1, Rui Katahira1, Wei Xiong4, Michael E Himmel4, Venkataramanan Subramanian4, Jeffrey G Linger1, Davinia Salvachúa5.   

Abstract

Lignin is a biopolymer found in plant cell walls that accounts for 30% of the organic carbon in the biosphere. White-rot fungi (WRF) are considered the most efficient organisms at degrading lignin in nature. While lignin depolymerization by WRF has been extensively studied, the possibility that WRF are able to utilize lignin as a carbon source is still a matter of controversy. Here, we employ 13C-isotope labeling, systems biology approaches, and in vitro enzyme assays to demonstrate that two WRF, Trametes versicolor and Gelatoporia subvermispora, funnel carbon from lignin-derived aromatic compounds into central carbon metabolism via intracellular catabolic pathways. These results provide insights into global carbon cycling in soil ecosystems and furthermore establish a foundation for employing WRF in simultaneous lignin depolymerization and bioconversion to bioproducts-a key step toward enabling a sustainable bioeconomy.

Entities:  

Keywords:  Gelatoporia subvermispora; Trametes versicolor; aromatic compounds; carbon cycling; metabolism

Year:  2021        PMID: 33622792      PMCID: PMC7936344          DOI: 10.1073/pnas.2017381118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  58 in total

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Journal:  Microbiol Mol Biol Rev       Date:  2000-06       Impact factor: 11.056

Review 2.  Consolidated bioprocessing of cellulosic biomass: an update.

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Journal:  Curr Opin Biotechnol       Date:  2005-10       Impact factor: 9.740

3.  Determination of metabolic flux ratios from 13C-experiments and gas chromatography-mass spectrometry data: protocol and principles.

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Journal:  Methods Mol Biol       Date:  2007

Review 4.  The beta-ketoadipate pathway and the biology of self-identity.

Authors:  C S Harwood; R E Parales
Journal:  Annu Rev Microbiol       Date:  1996       Impact factor: 15.500

Review 5.  The catalytic valorization of lignin for the production of renewable chemicals.

Authors:  Joseph Zakzeski; Pieter C A Bruijnincx; Anna L Jongerius; Bert M Weckhuysen
Journal:  Chem Rev       Date:  2010-06-09       Impact factor: 60.622

6.  Ecology. Fungal carbon sequestration.

Authors:  Kathleen K Treseder; Sandra R Holden
Journal:  Science       Date:  2013-03-29       Impact factor: 47.728

7.  Manganese-Mediated Lignin Degradation by Pleurotus pulmonarius.

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Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

Review 8.  Lignin biosynthesis.

Authors:  Wout Boerjan; John Ralph; Marie Baucher
Journal:  Annu Rev Plant Biol       Date:  2003       Impact factor: 26.379

9.  Lignin-Degrading Enzyme from the Hymenomycete Phanerochaete chrysosporium Burds.

Authors:  M Tien; T K Kirk
Journal:  Science       Date:  1983-08-12       Impact factor: 47.728

Review 10.  Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation.

Authors:  Dominik Danso; Jennifer Chow; Wolfgang R Streit
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

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  11 in total

1.  Characterization of two 1,2,4-trihydroxybenzene 1,2-dioxygenases from Phanerochaete chrysosporium.

Authors:  Hiroyuki Kato; Terumi T Furusawa; Reini Mori; Hiromitsu Suzuki; Masashi Kato; Motoyuki Shimizu
Journal:  Appl Microbiol Biotechnol       Date:  2022-06-10       Impact factor: 4.813

2.  White Rot Fungi Produce Novel Tire Wear Compound Metabolites and Reveal Underappreciated Amino Acid Conjugation Pathways.

Authors:  Erica A Wiener; Gregory H LeFevre
Journal:  Environ Sci Technol Lett       Date:  2022-03-18

Review 3.  Recent Advances in Synthesis and Degradation of Lignin and Lignin Nanoparticles and Their Emerging Applications in Nanotechnology.

Authors:  Virendra Kumar Yadav; Nitin Gupta; Pankaj Kumar; Marjan Ganjali Dashti; Vineet Tirth; Samreen Heena Khan; Krishna Kumar Yadav; Saiful Islam; Nisha Choudhary; Ali Algahtani; Sweta Parimita Bera; Do-Hyeon Kim; Byong-Hun Jeon
Journal:  Materials (Basel)       Date:  2022-01-26       Impact factor: 3.623

4.  Valorization of lignin components into gallate by integrated biological hydroxylation, O-demethylation, and aryl side-chain oxidation.

Authors:  Chenggu Cai; Zhaoxian Xu; Huarong Zhou; Sitong Chen; Mingjie Jin
Journal:  Sci Adv       Date:  2021-09-01       Impact factor: 14.136

Review 5.  Lignocellulosic Materials for the Production of Biofuels, Biochemicals and Biomaterials and Applications of Lignocellulose-Based Polyurethanes: A Review.

Authors:  Antonio M Borrero-López; Concepción Valencia; José M Franco
Journal:  Polymers (Basel)       Date:  2022-02-23       Impact factor: 4.329

Review 6.  Systems biology-guided understanding of white-rot fungi for biotechnological applications: A review.

Authors:  Teeratas Kijpornyongpan; Alexa Schwartz; Allison Yaguchi; Davinia Salvachúa
Journal:  iScience       Date:  2022-06-18

7.  Investigations on the Fusants From Wide Cross Between White-Rot Fungi and Saccharomyces cerevisiae Reveal Unknown Lignin Degradation Mechanism.

Authors:  Qi Shao; Xin Li; Ying Chen; Zhijun Zhang; Yong Cui; Huan Fan; Dongsheng Wei
Journal:  Front Microbiol       Date:  2022-07-11       Impact factor: 6.064

8.  Large-scale phenotyping of 1,000 fungal strains for the degradation of non-natural, industrial compounds.

Authors:  David Navarro; Delphine Chaduli; Sabine Taussac; Laurence Lesage-Meessen; Sacha Grisel; Mireille Haon; Philippe Callac; Régis Courtecuisse; Cony Decock; Joëlle Dupont; Florence Richard-Forget; Jacques Fournier; Jacques Guinberteau; Christian Lechat; Pierre-Arthur Moreau; Laetitia Pinson-Gadais; Bernard Rivoire; Lucile Sage; Stéphane Welti; Marie-Noëlle Rosso; Jean-Guy Berrin; Bastien Bissaro; Anne Favel
Journal:  Commun Biol       Date:  2021-07-15

9.  A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material.

Authors:  Ander Peña; Rashid Babiker; Delphine Chaduli; Anna Lipzen; Mei Wang; Mansi Chovatia; Jorge Rencoret; Gisela Marques; María Isabel Sánchez-Ruiz; Teeratas Kijpornyongpan; Davinia Salvachúa; Susana Camarero; Vivian Ng; Ana Gutiérrez; Igor V Grigoriev; Marie-Noëlle Rosso; Angel T Martínez; Francisco J Ruiz-Dueñas
Journal:  J Fungi (Basel)       Date:  2021-05-28

Review 10.  Fungal Laccases: The Forefront of Enzymes for Sustainability.

Authors:  Martina Loi; Olga Glazunova; Tatyana Fedorova; Antonio F Logrieco; Giuseppina Mulè
Journal:  J Fungi (Basel)       Date:  2021-12-07
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