| Literature DB >> 33615345 |
Eran Bendavid1, Bianca Mulaney2, Neeraj Sood3, Soleil Shah2, Rebecca Bromley-Dulfano2, Cara Lai2, Zoe Weissberg2, Rodrigo Saavedra-Walker4, Jim Tedrow5, Andrew Bogan6, Thomas Kupiec7, Daniel Eichner8, Ribhav Gupta9, John P A Ioannidis1,9, Jay Bhattacharya1.
Abstract
BACKGROUND: Measuring the seroprevalence of antibodies to Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is central to understanding infection risk and fatality rates. We studied Coronavirus Disease 2019 (COVID-19)-antibody seroprevalence in a community sample drawn from Santa Clara County.Entities:
Keywords: COVID-19; infection fatality rate; seroprevalence
Mesh:
Substances:
Year: 2021 PMID: 33615345 PMCID: PMC7928865 DOI: 10.1093/ije/dyab010
Source DB: PubMed Journal: Int J Epidemiol ISSN: 0300-5771 Impact factor: 7.196
Figure 1Flow diagram of participants who filled out the survey and registered, visited a site for testing and were associated with a tested specimen. We were able to associate 3328 individuals with complete survey, site and lab-result data. ‘Individuals with completed registrations’ refers to individuals who completed the initial online survey and were able to select a test site and time. ‘No-shows’ refers to participants who filled out the survey and obtained a site registration but for whom we do not have a record of attendance onsite. ‘Unverifiable IDs’ refers to records from the site data with duplicate participant identifications (IDs) for which we cannot verify which individual attended the site (this may be due to participants bringing incorrect IDs and/or technical errors in the REDCap ID assignment process). ‘Samples not collected or not tested’ includes at least 10 individuals who visited the site but did not consent to participate, as well as several children who may have decided not to have their fingers pricked after completing intake onsite. This also includes specimens that were lost before they could be tested in the lab. ‘Unusable or unmatched survey data’ includes individuals with invalid zip codes, participant IDs from the lab results that could not be matched back to the survey responses and participants who withdrew from the study. Unmatched participant IDs may be due to participants stating an incorrect participant ID at the test site or site data collectors incorrectly recording stated participant IDs. ‘Invalid lab result’ refers to one test for which the on-board control failed and the lab result could not be correctly interpreted.
Sample characteristics relative to Santa Clara County population estimates from the 2018 American Community Survey
| Characteristic | Sample—unweighted | Sample—weighted | County | |
|---|---|---|---|---|
| Population ( | 3328 | 3328 | 1 943 411 | |
| Women (%) | 63.1 | 49.5 | 49.5 | |
| Men (%) | 36.9 | 50.5 | 50.5 | |
| Age (%) | 0–19 | 19.1 | 25.5 | 25.5 |
| 20–39 | 27.3 | 29.2 | 29.2 | |
| 40–69 | 51.3 | 37.1 | 37.1 | |
| ⩾70 | 2.3 | 8.3 | 8.3 | |
| Race/ethnicity (%) | Non-Hispanic White | 64.1 | 33.1 | 33.1 |
| Hispanic | 8.0 | 26.4 | 26.3 | |
| Asian | 18.7 | 27.7 | 27.8 | |
| Other | 9.2 | 12.8 | 12.8 |
Univariate frequencies of positivity along demographic and clinical features
|
| Portion positive, unadjusted (%; | |||
|---|---|---|---|---|
| Race/ethnicity | White | 2116 | 1.0 | 21 |
| Asian | 623 | 1.9 | 12 | |
| Hispanic | 266 | 4.9 | 13 | |
| Other | 306 | 1.3 | 4 | |
| Total | 3311 | 1.5 | 50 | |
| Sex | Male | 1228 | 1.5 | 19 |
| Female | 2100 | 1.5 | 31 | |
| Total | 3328 | 1.5 | 50 | |
| Age | 0–19 | 637 | 1.4 | 9 |
| 20–39 | 907 | 1.9 | 17 | |
| 40–69 | 1706 | 1.3 | 23 | |
| ⩾70 | 78 | 1.3 | 1 | |
| Symptoms in past 2 weeks | Fever | 148 | 3.4 | 5 |
| Cough | 618 | 2.6 | 16 | |
| Shortness of breath | 200 | 3.0 | 6 | |
| Runny nose | 568 | 2.1 | 12 | |
| Sore throat | 542 | 1.8 | 10 | |
| Loss of smell | 60 | 21.7 | 13 | |
| Loss of taste | 59 | 22.0 | 13 | |
| No symptoms | 2156 | 1.0 | 22 | |
| Symptoms in past 2 months | Fever | 866 | 2.0 | 17 |
| Cough | 1534 | 1.6 | 25 | |
| Shortness of breath | 542 | 2.2 | 12 | |
| Runny nose | 1329 | 1.5 | 20 | |
| Sore throat | 1397 | 1.8 | 25 | |
| Loss of smell | 188 | 11.2 | 21 | |
| Loss of taste | 187 | 10.7 | 20 | |
| No symptoms | 1029 | 0.9 | 9 | |
17 people did not indicate race.
Prevalence estimation in Santa Clara County
| Approach | Point estimate (%) | Uncertainty (95% CI) |
|---|---|---|
| Unadjusted (%) | 50/3328 = 1.50% | 1.11–1.98% (binomial exact) |
| Adjusted for test performance (unweighted) | 1.22% | 0.66–1.79% |
| Adjusted for test performance and weighted | 2.76% | 1.32–4.22% |
We report the prevalence and uncertainty bounds of estimates from unadjusted frequency counts, estimates adjusted for test-performance characteristics and estimates adjusted for test-performance characteristics and weighted by zip code, sex, age and race/ethnicity. For adjusted prevalences, we estimate the point estimate and uncertainty using the bootstrap as described in the Methods and Supplementary Data, available as Supplementary data at IJE online.