| Literature DB >> 33604405 |
Ghady Haidar1,2, Ashley Ayres3, Wendy C King4, Mackenzie McDonald5, Alan Wells6, Stephanie L Mitchell6, Andrew L Bilderback7, Tami Minnier7, John W Mellors1,2.
Abstract
BACKGROUND: We implemented a preprocedural severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) screening initiative designed to sustain health care during a time when the extent of SARS-CoV-2 infection was unknown.Entities:
Keywords: COVID-19; SARS-CoV-2 PCR testing; preprocedural testing; presurgical testing
Year: 2021 PMID: 33604405 PMCID: PMC7880268 DOI: 10.1093/ofid/ofab022
Source DB: PubMed Journal: Open Forum Infect Dis ISSN: 2328-8957 Impact factor: 3.835
Preprocedural SARS-CoV-2 Testing Workflow for Academic Hospitalsa (April 21–June 11, 2020)
| Testing Platform | ≤7 Days Before Procedure | 1–4 Days Before Procedure | Day of Procedureb | After Procedure | |
|---|---|---|---|---|---|
| Contact patient | X (phone) | ||||
| Symptom screenc | X (phone) | X (in-person) | X (in-person) | ||
| Assess for barriers causing patients to decline testingd | X (phone) | ||||
| NP swab PCR, (results in ≤24 h) | UPMC laboratory-developed assay adapted from the CDC assay after EUA [ | X | Phone survey every 4 d for 14 d if PCR positive, starting on the date of the positive PCR | ||
| 2nd PCR for randomly selected subset (results in ≤1 h) | Cepheid Xpert Xpress SARS-CoV-2 test [ | X |
Abbreviations: CDC; Centers for Disease Control; d, days; EUA, emergency use authorization; h, hours; NP, nasopharyngeal; PCR, polymerase chain reaction; UPMC, University of Pittsburgh Medical Center.
aCommunity hospitals developed their own symptom screening and PCR testing workflows. After June 11, academic hospitals adjusted the PCR testing algorithms based on their own infrastructure.
bAs the process evolved, we developed the capacity to test patients only on the day of procedure on a case-by-case basis. Same-day testing ability was limited.
cPatients were assessed for fever, cough, and shortness of breath and were asked to self-report other symptoms during preprocedural phone calls, at the PCR testing visit, and on the procedure day. Hospital staff were asked to record symptoms in a central database.
dFor patients who declined, hospital staff were instructed to ask open-ended questions about why testing was declined. The responses were then grouped into broad categories.
Figure 1.Participant flow in in academic hospitals (April 21–June 11, 2020). aThese groups make up the “not tested group” in Table 2. bThis group agreed to undergo testing 1–4 days preprocedure, but testing was not done (reason for lack of test not recorded). Thus, they underwent same-day testing only instead. Abbreviations: EMR, electronic medical record; PCR, polymerase chain reaction.
Demographic, Procedure, and Testing Information for Academic Hospitals (April 21–June 11, 2020) by Testing Status
| Tested | Not tested |
| |
|---|---|---|---|
| n = 2415a | n = 3228a | ||
| Age, median (IQR, range), y | 61 (47–69, 15–93) | 58 (43–68, 13–96) | <.0001 |
| Age group, No. (%) | <.0001 | ||
| <18 y | 6 (0.3) | 22 (0.7) | |
| 18–39 y | 388 (16.1) | 669 (20.7) | |
| 40–59 y | 730 (30.2) | 1049 (32.5) | |
| 60–79 y | 1164 (48.2) | 1305 (40.4) | |
| ≥80 y | 127 (5.3) | 183 (5.7) | |
| Sex, No. (%) | n = 3225 | ||
| Female | 1343 (55.6) | 1802 (55.8) | .84 |
| Race, No. (%)b | n = 2332 | n = 3041 | <.001 |
| White | 2066 (88.6) | 2579 (84.8) | |
| Black | 240 (10.3) | 432 (14.2) | |
| Asian | 22 (0.9) | 22 (0.7) | |
| Other | 4 (0.2) | 8 (0.3) | |
| Ethnicity, No. (%)b | n = 1896 | n = 2665 | |
| Hispanic | 15 (0.8) | 23 (0.9) | .78 |
| Nursing home resident or incarceration | 2 (0.08) | 27 (0.8) | <.0001 |
| Procedure, No. (%)c | <.0001 | ||
| Colonoscopy/endoscopy | 451 (18.7) | 627 (21.2) | |
| Orthopedic | 401 (16.6) | 309 (10.4) | |
| General surgery | 230 (9.5) | 411 (13.9) | |
| Gynecological | 166 (6.1) | 215 (7.3) | |
| Neurosurgical | 133 (5.5) | 164 (5.5) | |
| Urological | 122 (4.6) | 140 (4.7) | |
| Cardiac | 122 (4.6) | 131 (4.4) | |
| Breast surgery | 86 (3.6) | 31 (1.1) | |
| Ophthalmology | 78 (3.2) | 50 (1.7) | |
| Otolaryngology | 74 (3.1) | 80 (2.7) | |
| Obstetric | 53 (2.2) | 134 (4.5) | |
| Vascular | 35 (1.4) | 101 (3.4) | |
| Other (<3% each in both groups)d | 524 (21.7) | 548 (18.6) | |
| Symptoms 1–4 d before procedure, No. (%)e | n = 817 | Not available | Not applicable |
| No symptoms | 799 (97.8) | ||
| Shortness of breath | 9 (1.1) | ||
| Cough | 7 (0.9) | ||
| Headache | 2 (0.2) | ||
| Allergies | 1 (0.1) | ||
| Fatigue | 1 (0.1) | ||
| Reason preprocedural testing was not performed, No. (%)f | Not applicable | Not applicable | |
| Unable to reach patient | 986 (30.5) | ||
| Patient provided no reason | 462 (14.3) | ||
| Unknown; patient agreed to testing but not tested | 303 (9.4) | ||
| Patient not interested | 430 (13.3) | ||
| Distance from testing location | 427 (13.2) | ||
| Patient self-isolating | 220 (6.8) | ||
| Patient believed they were previously tested | 97 (3.0) | ||
| Other commitments | 96 (3.0) | ||
| Lack of transport | 91 (2.8) | ||
| Patient believed they were not at risk for COVID-19 | 62 (1.9) | ||
| Patient was already hospitalized | 48 (1.5) | ||
| Nursing home residence or incarceration | 27 (0.8) | ||
| Fear of going to a testing center | 25 (0.8) | ||
| Currently symptomatic | 5 (0.2) | ||
| Other | 93 (2.9) |
Abbreviations: COVID-19, coronavirus disease 2019; IQR, interquartile range; PCR, polymerase chain reaction.
aTest by nasopharyngeal swab PCR. n = 2145, unless a lower value is specified within the table due to missing data. The “not tested” group includes 986 patients who could not be contacted, 1939 who declined testing, and 303 who did not attend a scheduled test visit or for whom no test result was found in the electronic medical records.
bRace and ethnicity were self-reported. Race was set to missing for participants who did not self-report their race as 1 or more of the investigator-defined categories (ie, White, Black, Asian, American Indian/Alaska Native, Native Hawaiian/other Pacific Islander, mixed race). Race categories other than White, Black, and Asian were combined as other race due to low representation.
cProcedure types were available for all tested patients and 2950 not-tested patients.
dThe following procedures were performed in <3% of patients in both groups; numbers in parentheses indicate tested vs not tested, respectively: cardiothoracic (n = 69 vs n = 56), endocrine surgery (n = 65 vs n = 40), bronchoscopy (n = 56 vs n = 47), interventional radiology (n = 54 vs n = 83), living donor kidney or liver transplant (n = 44 vs n = 0), hematopoietic cell transplant or chimeric antigen modified T-cell therapy (n = 31 vs n = 0), biopsy (n = 26 vs n = 39), tumor resection (n = 13 vs n = 9), other (n = 166 vs n = 314).
eOf 2415 patients, symptoms were recorded for only 817 patients during their preprocedural testing visits on days 1–4 before the procedure. Two patients reported >1 symptom.
f125 patients reported >1 reason for declining testing.
gNo test results could be found for these patients.