Literature DB >> 33603047

Assisting scalable diagnosis automatically via CT images in the combat against COVID-19.

Bohan Liu1,2, Pan Liu1,2, Lutao Dai3, Yanlin Yang4, Peng Xie5, Yiqing Tan6, Jicheng Du7, Wei Shan8, Chenghui Zhao1,2, Qin Zhong1,2, Xixiang Lin1,2, Xizhou Guan9, Ning Xing10, Yuhui Sun1,2, Wenjun Wang1,2, Zhibing Zhang11, Xia Fu12, Yanqing Fan13, Meifang Li14, Na Zhang15, Lin Li16,17, Yaou Liu18, Lin Xu19, Jingbo Du20, Zhenhua Zhao21, Xuelong Hu22, Weipeng Fan23, Rongpin Wang24, Chongchong Wu10, Yongkang Nie10, Liuquan Cheng10, Lin Ma10, Zongren Li1,2, Qian Jia1,2, Minchao Liu25, Huayuan Guo25, Gao Huang26, Haipeng Shen3,27, Liang Zhang28, Peifang Zhang28, Gang Guo28, Hao Li27, Weimin An29, Jianxin Zhou30, Kunlun He31,32.   

Abstract

The pandemic of Coronavirus Disease 2019 (COVID-19) is causing enormous loss of life globally. Prompt case identification is critical. The reference method is the real-time reverse transcription PCR (RT-PCR) assay, whose limitations may curb its prompt large-scale application. COVID-19 manifests with chest computed tomography (CT) abnormalities, some even before the onset of symptoms. We tested the hypothesis that the application of deep learning (DL) to 3D CT images could help identify COVID-19 infections. Using data from 920 COVID-19 and 1,073 non-COVID-19 pneumonia patients, we developed a modified DenseNet-264 model, COVIDNet, to classify CT images to either class. When tested on an independent set of 233 COVID-19 and 289 non-COVID-19 pneumonia patients, COVIDNet achieved an accuracy rate of 94.3% and an area under the curve of 0.98. As of March 23, 2020, the COVIDNet system had been used 11,966 times with a sensitivity of 91.12% and a specificity of 88.50% in six hospitals with PCR confirmation. Application of DL to CT images may improve both efficiency and capacity of case detection and long-term surveillance.

Entities:  

Year:  2021        PMID: 33603047      PMCID: PMC7892869          DOI: 10.1038/s41598-021-83424-5

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  18 in total

1.  An image-based deep learning framework for individualizing radiotherapy dose.

Authors:  Bin Lou; Semihcan Doken; Tingliang Zhuang; Danielle Wingerter; Mishka Gidwani; Nilesh Mistry; Lance Ladic; Ali Kamen; Mohamed E Abazeed
Journal:  Lancet Digit Health       Date:  2019-06-27

Review 2.  Imaging research in fibrotic lung disease; applying deep learning to unsolved problems.

Authors:  Simon L F Walsh; Stephen M Humphries; Athol U Wells; Kevin K Brown
Journal:  Lancet Respir Med       Date:  2020-02-25       Impact factor: 30.700

3.  False Negative Tests for SARS-CoV-2 Infection - Challenges and Implications.

Authors:  Steven Woloshin; Neeraj Patel; Aaron S Kesselheim
Journal:  N Engl J Med       Date:  2020-06-05       Impact factor: 91.245

4.  Prediction of lung cancer risk at follow-up screening with low-dose CT: a training and validation study of a deep learning method.

Authors:  Peng Huang; Cheng T Lin; Yuliang Li; Martin C Tammemagi; Malcolm V Brock; Sukhinder Atkar-Khattra; Yanxun Xu; Ping Hu; John R Mayo; Heidi Schmidt; Michel Gingras; Sergio Pasian; Lori Stewart; Scott Tsai; Jean M Seely; Daria Manos; Paul Burrowes; Rick Bhatia; Ming-Sound Tsao; Stephen Lam
Journal:  Lancet Digit Health       Date:  2019-10-17

5.  Early Transmission Dynamics in Wuhan, China, of Novel Coronavirus-Infected Pneumonia.

Authors:  Qun Li; Xuhua Guan; Peng Wu; Xiaoye Wang; Lei Zhou; Yeqing Tong; Ruiqi Ren; Kathy S M Leung; Eric H Y Lau; Jessica Y Wong; Xuesen Xing; Nijuan Xiang; Yang Wu; Chao Li; Qi Chen; Dan Li; Tian Liu; Jing Zhao; Man Liu; Wenxiao Tu; Chuding Chen; Lianmei Jin; Rui Yang; Qi Wang; Suhua Zhou; Rui Wang; Hui Liu; Yinbo Luo; Yuan Liu; Ge Shao; Huan Li; Zhongfa Tao; Yang Yang; Zhiqiang Deng; Boxi Liu; Zhitao Ma; Yanping Zhang; Guoqing Shi; Tommy T Y Lam; Joseph T Wu; George F Gao; Benjamin J Cowling; Bo Yang; Gabriel M Leung; Zijian Feng
Journal:  N Engl J Med       Date:  2020-01-29       Impact factor: 176.079

6.  A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster.

Authors:  Jasper Fuk-Woo Chan; Shuofeng Yuan; Kin-Hang Kok; Kelvin Kai-Wang To; Hin Chu; Jin Yang; Fanfan Xing; Jieling Liu; Cyril Chik-Yan Yip; Rosana Wing-Shan Poon; Hoi-Wah Tsoi; Simon Kam-Fai Lo; Kwok-Hung Chan; Vincent Kwok-Man Poon; Wan-Mui Chan; Jonathan Daniel Ip; Jian-Piao Cai; Vincent Chi-Chung Cheng; Honglin Chen; Christopher Kim-Ming Hui; Kwok-Yung Yuen
Journal:  Lancet       Date:  2020-01-24       Impact factor: 79.321

7.  Radiological findings from 81 patients with COVID-19 pneumonia in Wuhan, China: a descriptive study.

Authors:  Heshui Shi; Xiaoyu Han; Nanchuan Jiang; Yukun Cao; Osamah Alwalid; Jin Gu; Yanqing Fan; Chuansheng Zheng
Journal:  Lancet Infect Dis       Date:  2020-02-24       Impact factor: 25.071

8.  A Novel Coronavirus from Patients with Pneumonia in China, 2019.

Authors:  Na Zhu; Dingyu Zhang; Wenling Wang; Xingwang Li; Bo Yang; Jingdong Song; Xiang Zhao; Baoying Huang; Weifeng Shi; Roujian Lu; Peihua Niu; Faxian Zhan; Xuejun Ma; Dayan Wang; Wenbo Xu; Guizhen Wu; George F Gao; Wenjie Tan
Journal:  N Engl J Med       Date:  2020-01-24       Impact factor: 91.245

9.  Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period.

Authors:  Stephen M Kissler; Christine Tedijanto; Yonatan H Grad; Marc Lipsitch; Edward Goldstein
Journal:  Science       Date:  2020-04-14       Impact factor: 47.728

10.  Outbreak of pneumonia of unknown etiology in Wuhan, China: The mystery and the miracle.

Authors:  Hongzhou Lu; Charles W Stratton; Yi-Wei Tang
Journal:  J Med Virol       Date:  2020-02-12       Impact factor: 2.327

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  8 in total

1.  A Review on Deep Learning Techniques for the Diagnosis of Novel Coronavirus (COVID-19).

Authors:  Md Milon Islam; Fakhri Karray; Reda Alhajj; Jia Zeng
Journal:  IEEE Access       Date:  2021-02-10       Impact factor: 3.367

2.  A systematic review on AI/ML approaches against COVID-19 outbreak.

Authors:  Onur Dogan; Sanju Tiwari; M A Jabbar; Shankru Guggari
Journal:  Complex Intell Systems       Date:  2021-07-05

Review 3.  A Literature Review on the Use of Artificial Intelligence for the Diagnosis of COVID-19 on CT and Chest X-ray.

Authors:  Ciara Mulrenan; Kawal Rhode; Barbara Malene Fischer
Journal:  Diagnostics (Basel)       Date:  2022-03-31

4.  Modality alignment contrastive learning for severity assessment of COVID-19 from lung ultrasound and clinical information.

Authors:  Wufeng Xue; Chunyan Cao; Jie Liu; Yilian Duan; Haiyan Cao; Jian Wang; Xumin Tao; Zejian Chen; Meng Wu; Jinxiang Zhang; Hui Sun; Yang Jin; Xin Yang; Ruobing Huang; Feixiang Xiang; Yue Song; Manjie You; Wen Zhang; Lili Jiang; Ziming Zhang; Shuangshuang Kong; Ying Tian; Li Zhang; Dong Ni; Mingxing Xie
Journal:  Med Image Anal       Date:  2021-01-20       Impact factor: 8.545

Review 5.  Supervised and weakly supervised deep learning models for COVID-19 CT diagnosis: A systematic review.

Authors:  Haseeb Hassan; Zhaoyu Ren; Chengmin Zhou; Muazzam A Khan; Yi Pan; Jian Zhao; Bingding Huang
Journal:  Comput Methods Programs Biomed       Date:  2022-03-05       Impact factor: 7.027

6.  MA-Net:Mutex attention network for COVID-19 diagnosis on CT images.

Authors:  BingBing Zheng; Yu Zhu; Qin Shi; Dawei Yang; Yanmei Shao; Tao Xu
Journal:  Appl Intell (Dordr)       Date:  2022-04-09       Impact factor: 5.086

7.  ADA-COVID: Adversarial Deep Domain Adaptation-Based Diagnosis of COVID-19 from Lung CT Scans Using Triplet Embeddings.

Authors:  Mehrad Aria; Esmaeil Nourani; Amin Golzari Oskouei
Journal:  Comput Intell Neurosci       Date:  2022-02-08

Review 8.  Machine learning techniques for CT imaging diagnosis of novel coronavirus pneumonia: a review.

Authors:  Jingjing Chen; Yixiao Li; Lingling Guo; Xiaokang Zhou; Yihan Zhu; Qingfeng He; Haijun Han; Qilong Feng
Journal:  Neural Comput Appl       Date:  2022-09-19       Impact factor: 5.102

  8 in total

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