Literature DB >> 33602855

Cholangiocyte organoids can repair bile ducts after transplantation in the human liver.

Kourosh Saeb-Parsy1,2, Ludovic Vallier3,1, Fotios Sampaziotis3,4,5, Daniele Muraro6, Olivia C Tysoe6,1, Stephen Sawiak7, Timothy E Beach1, Edmund M Godfrey8, Sara S Upponi8, Teresa Brevini6, Brandon T Wesley6, Jose Garcia-Bernardo9, Krishnaa Mahbubani1, Giovanni Canu6, Richard Gieseck10, Natalie L Berntsen11,12,13, Victoria L Mulcahy4,14, Keziah Crick2, Corrina Fear2, Sharayne Robinson2, Lisa Swift2, Laure Gambardella6,4, Johannes Bargehr6,4,15, Daniel Ortmann6, Stephanie E Brown6, Anna Osnato6, Michael P Murphy16, Gareth Corbett17, William T H Gelson4,5, George F Mells4,5,14, Peter Humphreys6, Susan E Davies18, Irum Amin1,2, Paul Gibbs1,2, Sanjay Sinha6,4, Sarah A Teichmann9,19, Andrew J Butler1,2, Teik Choon See8, Espen Melum11,12,13,20,21, Christopher J E Watson1,2,22,23.   

Abstract

Organoid technology holds great promise for regenerative medicine but has not yet been applied to humans. We address this challenge using cholangiocyte organoids in the context of cholangiopathies, which represent a key reason for liver transplantation. Using single-cell RNA sequencing, we show that primary human cholangiocytes display transcriptional diversity that is lost in organoid culture. However, cholangiocyte organoids remain plastic and resume their in vivo signatures when transplanted back in the biliary tree. We then utilize a model of cell engraftment in human livers undergoing ex vivo normothermic perfusion to demonstrate that this property allows extrahepatic organoids to repair human intrahepatic ducts after transplantation. Our results provide proof of principle that cholangiocyte organoids can be used to repair human biliary epithelium.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2021        PMID: 33602855      PMCID: PMC7610478          DOI: 10.1126/science.aaz6964

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  37 in total

1.  Clinical patterns in Crohn's disease: a statistical study of 615 cases.

Authors:  R G Farmer; W A Hawk; R B Turnbull
Journal:  Gastroenterology       Date:  1975-04       Impact factor: 22.682

Review 2.  Translational applications of adult stem cell-derived organoids.

Authors:  Jarno Drost; Hans Clevers
Journal:  Development       Date:  2017-03-15       Impact factor: 6.868

3.  Liver Transplantation After Ex Vivo Normothermic Machine Preservation: A Phase 1 (First-in-Man) Clinical Trial.

Authors:  R Ravikumar; W Jassem; H Mergental; N Heaton; D Mirza; M T P R Perera; A Quaglia; D Holroyd; T Vogel; C C Coussios; P J Friend
Journal:  Am J Transplant       Date:  2016-03-07       Impact factor: 8.086

4.  Diffusion pseudotime robustly reconstructs lineage branching.

Authors:  Laleh Haghverdi; Maren Büttner; F Alexander Wolf; Florian Buettner; Fabian J Theis
Journal:  Nat Methods       Date:  2016-08-29       Impact factor: 28.547

5.  Time- and dose-based gene expression profiles produced by a bile-duct-damaging chemical, 4,4'-methylene dianiline, in mouse liver in an acute phase.

Authors:  Sun-Bom Kwon; Joon-Suk Park; Jung-Yeon Yi; Jae-Wong Hwang; Mingoo Kim; Mi-Ock Lee; Byung-Hoon Lee; Hyung-Lae Kim; Ju Han Kim; Heekyoung Chung; Gu Kong; Kyung-Sun Kang; Byung-Il Yoon
Journal:  Toxicol Pathol       Date:  2008-07-22       Impact factor: 1.902

6.  Colonic epithelial cell diversity in health and inflammatory bowel disease.

Authors:  Kaushal Parikh; Agne Antanaviciute; David Fawkner-Corbett; Marta Jagielowicz; Anna Aulicino; Christoffer Lagerholm; Simon Davis; James Kinchen; Hannah H Chen; Nasullah Khalid Alham; Neil Ashley; Errin Johnson; Philip Hublitz; Leyuan Bao; Joanna Lukomska; Rajinder Singh Andev; Elisabet Björklund; Benedikt M Kessler; Roman Fischer; Robert Goldin; Hashem Koohy; Alison Simmons
Journal:  Nature       Date:  2019-02-27       Impact factor: 49.962

7.  Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R.

Authors:  Davis J McCarthy; Kieran R Campbell; Aaron T L Lun; Quin F Wills
Journal:  Bioinformatics       Date:  2017-04-15       Impact factor: 6.937

8.  SCANPY: large-scale single-cell gene expression data analysis.

Authors:  F Alexander Wolf; Philipp Angerer; Fabian J Theis
Journal:  Genome Biol       Date:  2018-02-06       Impact factor: 13.583

9.  MUC Expression in Gallbladder Epithelial Tissues in Cholesterol-Associated Gallbladder Disease.

Authors:  Kyo-Sang Yoo; Ho Soon Choi; Dae Won Jun; Hang Lak Lee; Oh Young Lee; Byung Chul Yoon; Kyeong Geun Lee; Seung Sam Paik; Yong Seok Kim; Jin Lee
Journal:  Gut Liver       Date:  2016-09-15       Impact factor: 4.519

10.  Reversed graph embedding resolves complex single-cell trajectories.

Authors:  Xiaojie Qiu; Qi Mao; Ying Tang; Li Wang; Raghav Chawla; Hannah A Pliner; Cole Trapnell
Journal:  Nat Methods       Date:  2017-08-21       Impact factor: 47.990

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  21 in total

1.  Miniature organs to heal damaged livers.

Authors:  Benjamin Plackett
Journal:  Nature       Date:  2021-06-24       Impact factor: 49.962

Review 2.  Organoid transplant approaches for the liver.

Authors:  Hasan Al Reza; Ryo Okabe; Takanori Takebe
Journal:  Transpl Int       Date:  2021-11       Impact factor: 3.782

Review 3.  Defense of COVID-19 by Human Organoids.

Authors:  Ting Lv; Fanlu Meng; Meng Yu; Haihui Huang; Xinhua Lin; Bing Zhao
Journal:  Phenomics       Date:  2021-07-14

Review 4.  Cancer Risk and Mutational Patterns Following Organ Transplantation.

Authors:  Yangyang Shen; Di Lian; Kai Shi; Yuefeng Gao; Xiaoxiang Hu; Kun Yu; Qian Zhao; Chungang Feng
Journal:  Front Cell Dev Biol       Date:  2022-06-28

5.  Bile acid-sensitive tuft cells regulate biliary neutrophil influx.

Authors:  Claire E O'Leary; Julia Sbierski-Kind; Maya E Kotas; Johanna C Wagner; Hong-Erh Liang; Andrew W Schroeder; Jeshua C de Tenorio; Jakob von Moltke; Roberto R Ricardo-Gonzalez; Walter L Eckalbar; Ari B Molofsky; Christoph Schneider; Richard M Locksley
Journal:  Sci Immunol       Date:  2022-03-04

6.  Primary human hepatocyte gene editing: Prometheus' chains are loosening.

Authors:  Eleftherios Michailidis; Ype P de Jong
Journal:  Mol Ther       Date:  2021-04-22       Impact factor: 11.454

7.  Emerging cell therapy for biliary diseases.

Authors:  Simone N T Kurial; Holger Willenbring
Journal:  Science       Date:  2021-02-19       Impact factor: 47.728

8.  Cholangiocyte organoids as a cell source for biliary repair.

Authors:  Jeremy J Velazquez; Mo R Ebrahimkhani
Journal:  Transpl Int       Date:  2021-06-10       Impact factor: 3.842

Review 9.  Organogenesis in vitro.

Authors:  Kentaro Iwasawa; Takanori Takebe
Journal:  Curr Opin Cell Biol       Date:  2021-08-02       Impact factor: 8.382

10.  Cholangiocyte organoids from human bile retain a local phenotype and can repopulate bile ducts in vitro.

Authors:  Floris J M Roos; Haoyu Wu; Jorke Willemse; Ruby Lieshout; Laura A Muñoz Albarinos; Yik-Yang Kan; Jan-Werner Poley; Marco J Bruno; Jeroen de Jonge; Richard Bártfai; Hendrik Marks; Jan N M IJzermans; Monique M A Verstegen; Luc J W van der Laan
Journal:  Clin Transl Med       Date:  2021-12
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