Literature DB >> 33600347

What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask.

Griffin M Weber1, Tianxi Cai1, Isaac S Kohane1, Bruce J Aronow2, Paul Avillach1, Brett K Beaulieu-Jones1, Riccardo Bellazzi3,4, Robert L Bradford5, Gabriel A Brat1, Mario Cannataro6,7, James J Cimino8, Noelia García-Barrio9, Nils Gehlenborg1, Marzyeh Ghassemi10, Alba Gutiérrez-Sacristán1, David A Hanauer11, John H Holmes12, Chuan Hong1, Jeffrey G Klann13,14, Ne Hooi Will Loh15, Yuan Luo16, Kenneth D Mandl17, Mohamad Daniar18, Jason H Moore19, Shawn N Murphy1,20, Antoine Neuraz21,22, Kee Yuan Ngiam15, Gilbert S Omenn23, Nathan Palmer1, Lav P Patel24, Miguel Pedrera-Jiménez9, Piotr Sliz17, Andrew M South25, Amelia Li Min Tan1,26, Deanne M Taylor27,28, Bradley W Taylor29, Carlo Torti7, Andrew K Vallejos29, Kavishwar B Wagholikar13,14.   

Abstract

Coincident with the tsunami of COVID-19-related publications, there has been a surge of studies using real-world data, including those obtained from the electronic health record (EHR). Unfortunately, several of these high-profile publications were retracted because of concerns regarding the soundness and quality of the studies and the EHR data they purported to analyze. These retractions highlight that although a small community of EHR informatics experts can readily identify strengths and flaws in EHR-derived studies, many medical editorial teams and otherwise sophisticated medical readers lack the framework to fully critically appraise these studies. In addition, conventional statistical analyses cannot overcome the need for an understanding of the opportunities and limitations of EHR-derived studies. We distill here from the broader informatics literature six key considerations that are crucial for appraising studies utilizing EHR data: data completeness, data collection and handling (eg, transformation), data type (ie, codified, textual), robustness of methods against EHR variability (within and across institutions, countries, and time), transparency of data and analytic code, and the multidisciplinary approach. These considerations will inform researchers, clinicians, and other stakeholders as to the recommended best practices in reviewing manuscripts, grants, and other outputs from EHR-data derived studies, and thereby promote and foster rigor, quality, and reliability of this rapidly growing field. ©Isaac S Kohane, Bruce J Aronow, Paul Avillach, Brett K Beaulieu-Jones, Riccardo Bellazzi, Robert L Bradford, Gabriel A Brat, Mario Cannataro, James J Cimino, Noelia García-Barrio, Nils Gehlenborg, Marzyeh Ghassemi, Alba Gutiérrez-Sacristán, David A Hanauer, John H Holmes, Chuan Hong, Jeffrey G Klann, Ne Hooi Will Loh, Yuan Luo, Kenneth D Mandl, Mohamad Daniar, Jason H Moore, Shawn N Murphy, Antoine Neuraz, Kee Yuan Ngiam, Gilbert S Omenn, Nathan Palmer, Lav P Patel, Miguel Pedrera-Jiménez, Piotr Sliz, Andrew M South, Amelia Li Min Tan, Deanne M Taylor, Bradley W Taylor, Carlo Torti, Andrew K Vallejos, Kavishwar B Wagholikar, The Consortium For Clinical Characterization Of COVID-19 By EHR (4CE), Griffin M Weber, Tianxi Cai. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 02.03.2021.

Entities:  

Keywords:  COVID-19; data quality; electronic health records; literature; publishing; quality; real-world data; reporting checklist; reporting standards; review; statistics

Mesh:

Year:  2021        PMID: 33600347      PMCID: PMC7927948          DOI: 10.2196/22219

Source DB:  PubMed          Journal:  J Med Internet Res        ISSN: 1438-8871            Impact factor:   7.076


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