Literature DB >> 33597566

Automatic classification of canine thoracic radiographs using deep learning.

Tommaso Banzato1, Marek Wodzinski2, Alessandro Zotti3, Silvia Burti3, Valentina Longhin Osti3, Valentina Rossoni3, Manfredo Atzori4,5.   

Abstract

The interpretation of thoracic radiographs is a challenging and error-prone task for veterinarians. Despite recent advancements in machine learning and computer vision, the development of computer-aided diagnostic systems for radiographs remains a challenging and unsolved problem, particularly in the context of veterinary medicine. In this study, a novel method, based on multi-label deep convolutional neural network (CNN), for the classification of thoracic radiographs in dogs was developed. All the thoracic radiographs of dogs performed between 2010 and 2020 in the institution were retrospectively collected. Radiographs were taken with two different radiograph acquisition systems and were divided into two data sets accordingly. One data set (Data Set 1) was used for training and testing and another data set (Data Set 2) was used to test the generalization ability of the CNNs. Radiographic findings used as non mutually exclusive labels to train the CNNs were: unremarkable, cardiomegaly, alveolar pattern, bronchial pattern, interstitial pattern, mass, pleural effusion, pneumothorax, and megaesophagus. Two different CNNs, based on ResNet-50 and DenseNet-121 architectures respectively, were developed and tested. The CNN based on ResNet-50 had an Area Under the Receive-Operator Curve (AUC) above 0.8 for all the included radiographic findings except for bronchial and interstitial patterns both on Data Set 1 and Data Set 2. The CNN based on DenseNet-121 had a lower overall performance. Statistically significant differences in the generalization ability between the two CNNs were evident, with the CNN based on ResNet-50 showing better performance for alveolar pattern, interstitial pattern, megaesophagus, and pneumothorax.

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Year:  2021        PMID: 33597566      PMCID: PMC7889925          DOI: 10.1038/s41598-021-83515-3

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  23 in total

1.  Chest radiographs in the emergency department: is the radiologist really necessary?

Authors:  M E Gatt; G Spectre; O Paltiel; N Hiller; R Stalnikowicz
Journal:  Postgrad Med J       Date:  2003-04       Impact factor: 2.401

2.  Reducing error in radiographic interpretation.

Authors:  Kate Alexander
Journal:  Can Vet J       Date:  2010-05       Impact factor: 1.008

3.  Accuracy of diagnostic procedures: has it improved over the past five decades?

Authors:  Leonard Berlin
Journal:  AJR Am J Roentgenol       Date:  2007-05       Impact factor: 3.959

4.  Deep Learning at Chest Radiography: Automated Classification of Pulmonary Tuberculosis by Using Convolutional Neural Networks.

Authors:  Paras Lakhani; Baskaran Sundaram
Journal:  Radiology       Date:  2017-04-24       Impact factor: 11.105

5.  Use of transfer learning to detect diffuse degenerative hepatic diseases from ultrasound images in dogs: A methodological study.

Authors:  T Banzato; F Bonsembiante; L Aresu; M E Gelain; S Burti; A Zotti
Journal:  Vet J       Date:  2018-01-03       Impact factor: 2.688

6.  Development and Validation of Deep Learning-based Automatic Detection Algorithm for Malignant Pulmonary Nodules on Chest Radiographs.

Authors:  Ju Gang Nam; Sunggyun Park; Eui Jin Hwang; Jong Hyuk Lee; Kwang-Nam Jin; Kun Young Lim; Thienkai Huy Vu; Jae Ho Sohn; Sangheum Hwang; Jin Mo Goo; Chang Min Park
Journal:  Radiology       Date:  2018-09-25       Impact factor: 11.105

7.  Comparison of Deep Learning Approaches for Multi-Label Chest X-Ray Classification.

Authors:  Ivo M Baltruschat; Hannes Nickisch; Michael Grass; Tobias Knopp; Axel Saalbach
Journal:  Sci Rep       Date:  2019-04-23       Impact factor: 4.379

8.  CNN-based diagnosis models for canine ulcerative keratitis.

Authors:  Joon Young Kim; Ha Eun Lee; Yeon Hyung Choi; Suk Jun Lee; Jong Soo Jeon
Journal:  Sci Rep       Date:  2019-10-02       Impact factor: 4.379

9.  Accuracy of deep learning to differentiate the histopathological grading of meningiomas on MR images: A preliminary study.

Authors:  Tommaso Banzato; Francesco Causin; Alessandro Della Puppa; Giacomo Cester; Linda Mazzai; Alessandro Zotti
Journal:  J Magn Reson Imaging       Date:  2019-03-21       Impact factor: 4.813

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  4 in total

1.  Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats.

Authors:  Caroline Boulocher; Thomas Grenier; Léo Dumortier; Florent Guépin; Marie-Laure Delignette-Muller
Journal:  Sci Rep       Date:  2022-07-06       Impact factor: 4.996

2.  A Machine Learning-Based Approach for Classification of Focal Splenic Lesions Based on Their CT Features.

Authors:  Silvia Burti; Alessandro Zotti; Federico Bonsembiante; Barbara Contiero; Tommaso Banzato
Journal:  Front Vet Sci       Date:  2022-05-02

Review 3.  Moving Beyond the Limits of Detection: The Past, the Present, and the Future of Diagnostic Imaging in Canine Osteoarthritis.

Authors:  Gareth M C Jones; Andrew A Pitsillides; Richard L Meeson
Journal:  Front Vet Sci       Date:  2022-03-15

Review 4.  Golden Standard or Obsolete Method? Review of ECG Applications in Clinical and Experimental Context.

Authors:  Tibor Stracina; Marina Ronzhina; Richard Redina; Marie Novakova
Journal:  Front Physiol       Date:  2022-04-25       Impact factor: 4.755

  4 in total

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