Literature DB >> 33596458

External validation of clinical prediction models: simulation-based sample size calculations were more reliable than rules-of-thumb.

Kym I E Snell1, Lucinda Archer2, Joie Ensor2, Laura J Bonnett3, Thomas P A Debray4, Bob Phillips5, Gary S Collins6, Richard D Riley2.   

Abstract

INTRODUCTION: Sample size "rules-of-thumb" for external validation of clinical prediction models suggest at least 100 events and 100 non-events. Such blanket guidance is imprecise, and not specific to the model or validation setting. We investigate factors affecting precision of model performance estimates upon external validation, and propose a more tailored sample size approach.
METHODS: Simulation of logistic regression prediction models to investigate factors associated with precision of performance estimates. Then, explanation and illustration of a simulation-based approach to calculate the minimum sample size required to precisely estimate a model's calibration, discrimination and clinical utility.
RESULTS: Precision is affected by the model's linear predictor (LP) distribution, in addition to number of events and total sample size. Sample sizes of 100 (or even 200) events and non-events can give imprecise estimates, especially for calibration. The simulation-based calculation accounts for the LP distribution and (mis)calibration in the validation sample. Application identifies 2430 required participants (531 events) for external validation of a deep vein thrombosis diagnostic model.
CONCLUSION: Where researchers can anticipate the distribution of the model's LP (eg, based on development sample, or a pilot study), a simulation-based approach for calculating sample size for external validation offers more flexibility and reliability than rules-of-thumb.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Calibration and discrimination; Clinical prediction model; External validation; Net benefit; Sample size; Simulation

Year:  2021        PMID: 33596458     DOI: 10.1016/j.jclinepi.2021.02.011

Source DB:  PubMed          Journal:  J Clin Epidemiol        ISSN: 0895-4356            Impact factor:   6.437


  9 in total

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3.  Broad external validation of a multivariable risk prediction model for gastrointestinal malignancy in iron deficiency anaemia.

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Authors:  Janne M Veerbeek; Johannes Pohl; Andreas R Luft; Jeremia P O Held
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9.  Estimation of required sample size for external validation of risk models for binary outcomes.

Authors:  Menelaos Pavlou; Chen Qu; Rumana Z Omar; Shaun R Seaman; Ewout W Steyerberg; Ian R White; Gareth Ambler
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  9 in total

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