Literature DB >> 33592799

Lab in a tube: Isolation, extraction, and isothermal amplification detection of exosomal long noncoding RNA of gastric cancer.

Qiuyuan Lin1, Zhipeng Huang1, Xin Ye1, Bin Yang1, Xueen Fang1, Baohong Liu2, Hui Chen3, Jilie Kong4.   

Abstract

Tumor-derived exosomes that inherit molecular information on parental cells hold great promise for cancer diagnostics. Currently, two main technical challenges, time-consuming and labor-intensive isolation of exosome and nucleic acid extraction with limited recovery that have restricted the detection of ultralow abundance exosomal nucleic acids. Here, we proposed a simple, efficient and "lab in a tube" system for the detection of exosomal nucleic acids, which fully integrated exosomes enrichment using immunomagnetic beads (IMB) (10 min), fast exosomes lysis based on NP-40 lysate (5 min) and sensitive loop-mediated isothermal amplification (LAMP) in a tube. This method was demonstrated by detecting two exosomal long noncoding RNA biomarkers of gastric cancer (HOTTIP and lncRNA-GC1) with a dynamic detection ranging from 300 ng/μL to 10 ng/μL, and the detection limit of LAMP was 10 ng/μL. Additionally, this platform exhibited good performance in the analysis of exosomal HOTTIP RNA directly in human serum samples, which has the potential for detection of low-abundance exosomal nucleic acid biomarkers from cancers.
Copyright © 2021. Published by Elsevier B.V.

Entities:  

Keywords:  Exosomal long noncoding RNA; Immunomagnetic beads isolation; Loop-mediated isothermal amplification (LAMP); Nucleic acid extraction

Mesh:

Substances:

Year:  2021        PMID: 33592799     DOI: 10.1016/j.talanta.2021.122090

Source DB:  PubMed          Journal:  Talanta        ISSN: 0039-9140            Impact factor:   6.057


  4 in total

1.  Tumor-derived exosomes orchestrate the microRNA-128-3p/ELF4/CDX2 axis to facilitate the growth and metastasis of gastric cancer via delivery of LINC01091.

Authors:  Qiang Wang; Chunmei Zhang; Shengya Cao; Hongying Zhao; Rongke Jiang; Yanfang Li
Journal:  Cell Biol Toxicol       Date:  2022-06-08       Impact factor: 6.691

2.  TTN-AS1 delivered by gastric cancer cell-derived exosome induces gastric cancer progression through in vivo and in vitro studies.

Authors:  Yu Wang; Rongke Jiang; Hongying Zhao; Feng Li; Yanfang Li; Mei Zhu
Journal:  Cell Biol Toxicol       Date:  2022-10-10       Impact factor: 6.819

3.  Dual-modality loop-mediated isothermal amplification for pretreatment-free detection of Septin9 methylated DNA in colorectal cancer.

Authors:  Qiuyuan Lin; Xueen Fang; Hui Chen; Wenhao Weng; Baohong Liu; Jilie Kong
Journal:  Mikrochim Acta       Date:  2021-08-27       Impact factor: 5.833

Review 4.  The role and application of small extracellular vesicles in gastric cancer.

Authors:  Hao Wu; Mengdi Fu; Jin Liu; Wei Chong; Zhen Fang; Fengying Du; Yang Liu; Liang Shang; Leping Li
Journal:  Mol Cancer       Date:  2021-04-29       Impact factor: 27.401

  4 in total

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