Literature DB >> 33590427

Comprehensive Genetic Analysis of Non-syndromic Autism Spectrum Disorder in Clinical Settings.

Kei Ohashi1, Satomi Fukuhara1, Taishi Miyachi1, Tomoko Asai1, Masayuki Imaeda1, Masahide Goto2, Yoshie Kurokawa2, Tatsuya Anzai2, Yoshinori Tsurusaki3,4, Noriko Miyake3, Naomichi Matsumoto3, Takanori Yamagata2, Shinji Saitoh5.   

Abstract

Although genetic factors are involved in the etiology of autism spectrum disorder (ASD), the significance of genetic analysis in clinical settings is unclear. Forty-nine subjects diagnosed with non-syndromic ASD were analyzed by microarray comparative genomic hybridization (CGH) analysis, whole-exome sequencing (WES) analysis, and panel sequencing analysis for 52 common causative genes of ASD to detect inherited rare variants. Genetic analysis by microarray CGH and WES analyses showed conclusive results in about 10% of patients, however, many inherited variants detected by panel sequencing analysis were difficult to interpret and apply in clinical practice in the majority of patients. Further improvement of interpretation of many variants detected would be necessary for combined genetic tests to be used in clinical settings.

Entities:  

Keywords:  Autism spectrum disorder; Genetic analysis; Microarray comparative genomic hybridization; Whole-exome sequencing

Year:  2021        PMID: 33590427     DOI: 10.1007/s10803-021-04910-3

Source DB:  PubMed          Journal:  J Autism Dev Disord        ISSN: 0162-3257


  25 in total

Review 1.  Exome sequencing and whole genome sequencing for the detection of copy number variation.

Authors:  Jayne Y Hehir-Kwa; Rolph Pfundt; Joris A Veltman
Journal:  Expert Rev Mol Diagn       Date:  2015-06-18       Impact factor: 5.225

2.  Comprehensive genetic analysis of 57 families with clinically suspected Cornelia de Lange syndrome.

Authors:  Hiromi Aoi; Takeshi Mizuguchi; José Ricard Ceroni; Veronica Eun Hue Kim; Isabel Furquim; Rachel S Honjo; Takuma Iwaki; Toshifumi Suzuki; Futoshi Sekiguchi; Yuri Uchiyama; Yoshiteru Azuma; Kohei Hamanaka; Eriko Koshimizu; Satoko Miyatake; Satomi Mitsuhashi; Atsushi Takata; Noriko Miyake; Satoru Takeda; Atsuo Itakura; Débora R Bertola; Chong Ae Kim; Naomichi Matsumoto
Journal:  J Hum Genet       Date:  2019-07-23       Impact factor: 3.172

3.  What is a meaningful result? Disclosing the results of genomic research in autism to research participants.

Authors:  Fiona Alice Miller; Robin Zoe Hayeems; Jessica Peace Bytautas
Journal:  Eur J Hum Genet       Date:  2010-03-17       Impact factor: 4.246

4.  Genetic testing and counseling in the case of an autism diagnosis: A caregivers perspective.

Authors:  Kristien Hens; Hilde Peeters; Kris Dierickx
Journal:  Eur J Med Genet       Date:  2016-08-17       Impact factor: 2.708

Review 5.  Getting to the Cores of Autism.

Authors:  Lilia M Iakoucheva; Alysson R Muotri; Jonathan Sebat
Journal:  Cell       Date:  2019-09-05       Impact factor: 41.582

6.  Comprehensive molecular testing in patients with high functioning autism spectrum disorder.

Authors:  Maria Isabel Alvarez-Mora; Rosa Calvo Escalona; Olga Puig Navarro; Irene Madrigal; Ines Quintela; Jorge Amigo; Dei Martinez-Elurbe; Michaela Linder-Lucht; Gemma Aznar Lain; Angel Carracedo; Montserrat Mila; Laia Rodriguez-Revenga
Journal:  Mutat Res       Date:  2016-01-06       Impact factor: 2.433

Review 7.  Autistic phenotypes and genetic testing: state-of-the-art for the clinical geneticist.

Authors:  C Lintas; A M Persico
Journal:  J Med Genet       Date:  2008-08-26       Impact factor: 6.318

8.  Most genetic risk for autism resides with common variation.

Authors:  Trent Gaugler; Lambertus Klei; Stephan J Sanders; Corneliu A Bodea; Arthur P Goldberg; Ann B Lee; Milind Mahajan; Dina Manaa; Yudi Pawitan; Jennifer Reichert; Stephan Ripke; Sven Sandin; Pamela Sklar; Oscar Svantesson; Abraham Reichenberg; Christina M Hultman; Bernie Devlin; Kathryn Roeder; Joseph D Buxbaum
Journal:  Nat Genet       Date:  2014-07-20       Impact factor: 38.330

9.  Genetic testing including targeted gene panel in a diverse clinical population of children with autism spectrum disorder: Findings and implications.

Authors:  Louisa Kalsner; Jennifer Twachtman-Bassett; Kristin Tokarski; Christine Stanley; Thyde Dumont-Mathieu; Justin Cotney; Stormy Chamberlain
Journal:  Mol Genet Genomic Med       Date:  2017-12-21       Impact factor: 2.183

10.  Common genetic variants, acting additively, are a major source of risk for autism.

Authors:  Lambertus Klei; Stephan J Sanders; Michael T Murtha; Vanessa Hus; Jennifer K Lowe; A Jeremy Willsey; Daniel Moreno-De-Luca; Timothy W Yu; Eric Fombonne; Daniel Geschwind; Dorothy E Grice; David H Ledbetter; Catherine Lord; Shrikant M Mane; Christa Lese Martin; Donna M Martin; Eric M Morrow; Christopher A Walsh; Nadine M Melhem; Pauline Chaste; James S Sutcliffe; Matthew W State; Edwin H Cook; Kathryn Roeder; Bernie Devlin
Journal:  Mol Autism       Date:  2012-10-15       Impact factor: 7.509

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  1 in total

1.  Case report: FOXP1 syndrome caused by a de novo splicing variant (c.1652+5 G>A) of the FOXP1 gene.

Authors:  Min Chen; Yixi Sun; Yeqing Qian; Na Chen; Hongge Li; Liya Wang; Minyue Dong
Journal:  Front Genet       Date:  2022-08-05       Impact factor: 4.772

  1 in total

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