Literature DB >> 33589715

Identification of sarcomatoid differentiation in renal cell carcinoma by machine learning on multiparametric MRI.

Asim Mazin1, Samuel H Hawkins1,2, Olya Stringfield3, Jasreman Dhillon4,5, Brandon J Manley6,5, Daniel K Jeong7,5, Natarajan Raghunand8,9.   

Abstract

Sarcomatoid differentiation in RCC (sRCC) is associated with a poor prognosis, necessitating more aggressive management than RCC without sarcomatoid components (nsRCC). Since suspected renal cell carcinoma (RCC) tumors are not routinely biopsied for histologic evaluation, there is a clinical need for a non-invasive method to detect sarcomatoid differentiation pre-operatively. We utilized unsupervised self-organizing map (SOM) and supervised Learning Vector Quantizer (LVQ) machine learning to classify RCC tumors on T2-weighted, non-contrast T1-weighted fat-saturated, contrast-enhanced arterial-phase T1-weighted fat-saturated, and contrast-enhanced venous-phase T1-weighted fat-saturated MRI images. The SOM was trained on 8 nsRCC and 8 sRCC tumors, and used to compute Activation Maps for each training, validation (3 nsRCC and 3 sRCC), and test (5 nsRCC and 5 sRCC) tumor. The LVQ classifier was trained and optimized on Activation Maps from the 22 training and validation cohort tumors, and tested on Activation Maps of the 10 unseen test tumors. In this preliminary study, the SOM-LVQ model achieved a hold-out testing accuracy of 70% in the task of identifying sarcomatoid differentiation in RCC on standard multiparameter MRI (mpMRI) images. We have demonstrated a combined SOM-LVQ machine learning approach that is suitable for analysis of limited mpMRI datasets for the task of differential diagnosis.

Entities:  

Mesh:

Year:  2021        PMID: 33589715      PMCID: PMC7884398          DOI: 10.1038/s41598-021-83271-4

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  34 in total

Review 1.  Machine Learning for Medical Imaging.

Authors:  Bradley J Erickson; Panagiotis Korfiatis; Zeynettin Akkus; Timothy L Kline
Journal:  Radiographics       Date:  2017-02-17       Impact factor: 5.333

2.  Influence of segmentation margin on machine learning-based high-dimensional quantitative CT texture analysis: a reproducibility study on renal clear cell carcinomas.

Authors:  Burak Kocak; Ece Ates; Emine Sebnem Durmaz; Melis Baykara Ulusan; Ozgur Kilickesmez
Journal:  Eur Radiol       Date:  2019-02-12       Impact factor: 5.315

3.  Hierarchical feature representation and multimodal fusion with deep learning for AD/MCI diagnosis.

Authors:  Heung-Il Suk; Seong-Whan Lee; Dinggang Shen
Journal:  Neuroimage       Date:  2014-07-18       Impact factor: 6.556

4.  Diagnosis of Sarcomatoid Renal Cell Carcinoma With CT: Evaluation by Qualitative Imaging Features and Texture Analysis.

Authors:  Nicola Schieda; Rebecca E Thornhill; Maali Al-Subhi; Matthew D F McInnes; Wael M Shabana; Christian B van der Pol; Trevor A Flood
Journal:  AJR Am J Roentgenol       Date:  2015-05       Impact factor: 3.959

Review 5.  Methodologic Guide for Evaluating Clinical Performance and Effect of Artificial Intelligence Technology for Medical Diagnosis and Prediction.

Authors:  Seong Ho Park; Kyunghwa Han
Journal:  Radiology       Date:  2018-01-08       Impact factor: 11.105

Review 6.  Machine Learning in Medical Imaging.

Authors:  Maryellen L Giger
Journal:  J Am Coll Radiol       Date:  2018-02-02       Impact factor: 5.532

7.  Computer-aided detection of prostate cancer in MRI.

Authors:  Geert Litjens; Oscar Debats; Jelle Barentsz; Nico Karssemeijer; Henkjan Huisman
Journal:  IEEE Trans Med Imaging       Date:  2014-05       Impact factor: 10.048

8.  Multispectral analysis of uterine corpus tumors in magnetic resonance imaging.

Authors:  T Taxt; A Lundervold; B Fuglaas; H Lien; V Abeler
Journal:  Magn Reson Med       Date:  1992-01       Impact factor: 4.668

9.  Deep Learning with Convolutional Neural Network for Differentiation of Liver Masses at Dynamic Contrast-enhanced CT: A Preliminary Study.

Authors:  Koichiro Yasaka; Hiroyuki Akai; Osamu Abe; Shigeru Kiryu
Journal:  Radiology       Date:  2017-10-23       Impact factor: 11.105

Review 10.  Radiomics Applications in Renal Tumor Assessment: A Comprehensive Review of the Literature.

Authors:  Rodrigo Suarez-Ibarrola; Mario Basulto-Martinez; Alexander Heinze; Christian Gratzke; Arkadiusz Miernik
Journal:  Cancers (Basel)       Date:  2020-05-28       Impact factor: 6.639

View more
  1 in total

1.  Magnetic resonance imaging (MRI) helps differentiate renal cell carcinoma with sarcomatoid differentiation from renal cell carcinoma without sarcomatoid differentiation.

Authors:  Mitsuru Takeuchi; Adam T Froemming; Akira Kawashima; Prabin Thapa; Rickey E Carter; John C Cheville; R Houston Thompson; Naoki Takahashi
Journal:  Abdom Radiol (NY)       Date:  2022-04-05
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.