Literature DB >> 33588029

Signal and noise in circRNA translation.

T B Hansen1.   

Abstract

Within recent years, circular RNAs (circRNAs) have been an attractive new field of research in RNA biology and disease. Consequently, numerous studies have been published towards the disclosure of circRNA biogenesis and function. Initially, circRNAs were described as a subclass of cytoplasmic non-coding RNA, however, a few recent observations have proposed that circRNAs may instead be templates for protein production. The extent to which this is the case is currently debated, and therefore using rigorous data analysis and proper experimental setups is instrumental to settle the current controversies. Here, the conventional experiments used for detecting circRNA translation are outlined, and guidelines to distinguish signal from the inherent noise are discussed. While these guidelines are specific for circRNA translation, most also apply to other aspects of non-canonical translation.
Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Artefacts; Circular RNA; Mass spectrometry; Mass-spec; RiboSeq; Translation; circRNA

Mesh:

Substances:

Year:  2021        PMID: 33588029     DOI: 10.1016/j.ymeth.2021.02.007

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  3 in total

Review 1.  The emerging roles of circRNAs in cancer and oncology.

Authors:  Lasse S Kristensen; Theresa Jakobsen; Henrik Hager; Jørgen Kjems
Journal:  Nat Rev Clin Oncol       Date:  2021-12-15       Impact factor: 66.675

Review 2.  Emerging biology of noncoding RNAs in malaria parasites.

Authors:  Karina Simantov; Manish Goyal; Ron Dzikowski
Journal:  PLoS Pathog       Date:  2022-07-07       Impact factor: 7.464

3.  Circular RNAs exhibit limited evidence for translation, or translation regulation of the mRNA counterpart in terminal hematopoiesis.

Authors:  Benoit P Nicolet; Sjoert B G Jansen; Esther Heideveld; Willem H Ouwehand; Emile van den Akker; Marieke von Lindern; Monika C Wolkers
Journal:  RNA       Date:  2021-11-03       Impact factor: 4.942

  3 in total

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