Literature DB >> 33587607

High-Throughput Peptide Derivatization toward Supramolecular Diversification in Microtiter Plates.

Yiyang Lin1,2, Matthew Penna3, Christopher D Spicer4, Stuart G Higgins1, Amy Gelmi1, Nayoung Kim1, Shih-Ting Wang1, Jonathan P Wojciechowski1, E Thomas Pashuck1, Irene Yarovsky3, Molly M Stevens1,4.   

Abstract

The evolution of life on earth eventually leads to the emergence of species with increased complexity and diversity. Similarly, evolutionary chemical space exploration in the laboratory is a key step to pursue the structural and functional diversity of supramolecular systems. Here, we present a powerful tool that enables rapid peptide diversification and employ it to expand the chemical space for supramolecular functions. Central to this strategy is the exploitation of palladium-catalyzed Suzuki-Miyaura cross-coupling reactions to direct combinatorial synthesis of peptide arrays in microtiter plates under an open atmosphere. Taking advantage of this in situ library design, our results unambiguously deliver a fertile platform for creating a set of intriguing peptide functions including green fluorescent protein-like peptide emitters with chemically encoded emission colors, hierarchical self-assembly into nano-objects, and macroscopic hydrogels. This work also offers opportunities for quickly surveying the diversified peptide arrays and thereby identifying the structural factors that modulate peptide properties.

Entities:  

Keywords:  Suzuki−Miyaura cross coupling; combinatorial synthesis; high-throughput screening; peptide; self-assembly

Mesh:

Substances:

Year:  2021        PMID: 33587607      PMCID: PMC7992134          DOI: 10.1021/acsnano.0c05423

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  54 in total

1.  Design of self-assembly dipeptide hydrogels and machine learning via their chemical features.

Authors:  Fei Li; Jinsong Han; Tian Cao; William Lam; Baoer Fan; Wen Tang; Sijie Chen; Kin Lam Fok; Linxian Li
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-20       Impact factor: 11.205

2.  Parasitic Behavior of Self-Replicating Molecules.

Authors:  Meniz Altay; Yigit Altay; Sijbren Otto
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-27       Impact factor: 15.336

3.  Hierarchical Self-Assembly of Histidine-Functionalized Peptide Amphiphiles into Supramolecular Chiral Nanostructures.

Authors:  Meryem Hatip Koc; Goksu Cinar Ciftci; Sefer Baday; Valeria Castelletto; Ian W Hamley; Mustafa O Guler
Journal:  Langmuir       Date:  2017-08-02       Impact factor: 3.882

4.  Design of Asymmetric Peptide Bilayer Membranes.

Authors:  Sha Li; Anil K Mehta; Anton N Sidorov; Thomas M Orlando; Zhigang Jiang; Neil R Anthony; David G Lynn
Journal:  J Am Chem Soc       Date:  2016-03-04       Impact factor: 15.419

5.  On the Role of Chirality in Guiding the Self-Assembly of Peptides.

Authors:  Shibaji Basak; Ishwar Singh; Annaleizle Ferranco; Jebreil Syed; Heinz-Bernhard Kraatz
Journal:  Angew Chem Int Ed Engl       Date:  2017-09-21       Impact factor: 15.336

6.  Regulating Higher-Order Organization through the Synergy of Two Self-Sorted Assemblies.

Authors:  Wei Ji; Shijin Zhang; Sachie Yukawa; Shogo Onomura; Toshio Sasaki; Kun'ichi Miyazawa; Ye Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-01       Impact factor: 15.336

7.  Synthesis of proteins by automated flow chemistry.

Authors:  A Saebi; M Poskus; N Hartrampf; Z P Gates; A J Callahan; A E Cowfer; S Hanna; S Antilla; C K Schissel; A J Quartararo; X Ye; A J Mijalis; M D Simon; A Loas; S Liu; C Jessen; T E Nielsen; B L Pentelute
Journal:  Science       Date:  2020-05-29       Impact factor: 47.728

8.  CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields.

Authors:  K Vanommeslaeghe; E Hatcher; C Acharya; S Kundu; S Zhong; J Shim; E Darian; O Guvench; P Lopes; I Vorobyov; A D Mackerell
Journal:  J Comput Chem       Date:  2010-03       Impact factor: 3.376

9.  Will it gel? Successful computational prediction of peptide gelators using physicochemical properties and molecular fingerprints.

Authors:  Jyoti K Gupta; Dave J Adams; Neil G Berry
Journal:  Chem Sci       Date:  2016-04-13       Impact factor: 9.825

10.  Tunable Pentapeptide Self-Assembled β-Sheet Hydrogels.

Authors:  David E Clarke; Christopher D J Parmenter; Oren A Scherman
Journal:  Angew Chem Int Ed Engl       Date:  2018-05-17       Impact factor: 15.336

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  2 in total

1.  The Impact of Tyrosine Iodination on the Aggregation and Cleavage Kinetics of MMP-9-Responsive Peptide Sequences.

Authors:  Douglas S MacPherson; Scott A McPhee; Brian M Zeglis; Rein V Ulijn
Journal:  ACS Biomater Sci Eng       Date:  2022-01-20

2.  Guest Molecule-Mediated Energy Harvesting in a Conformationally Sensitive Peptide-Metal Organic Framework.

Authors:  Yu Chen; Sarah Guerin; Hui Yuan; Joseph O'Donnell; Bin Xue; Pierre-Andre Cazade; Ehtsham Ul Haq; Linda J W Shimon; Sigal Rencus-Lazar; Syed A M Tofail; Yi Cao; Damien Thompson; Rusen Yang; Ehud Gazit
Journal:  J Am Chem Soc       Date:  2022-01-24       Impact factor: 15.419

  2 in total

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