William C Witt1, Benjamin W B Shires1, Chuin Wei Tan2, Wojciech J Jankowski3, Chris J Pickard1,4. 1. Department of Materials Science and Metallurgy, University of Cambridge, Cambridge, U.K. 2. Downing College, University of Cambridge, Cambridge, U.K. 3. Trinity College, University of Cambridge, Cambridge, U.K. 4. Advanced Institute for Materials Research, Tohoku University, Sendai, Japan.
Abstract
The properties of a material depend on how its atoms are arranged, and predicting these arrangements from first principles is a longstanding challenge. Orbital-free density functional theory provides a quantum-mechanical model based solely on the electron density, not individual wave functions. The resulting speedups make it attractive for random structure searching, whereby random configurations of atoms are relaxed to local minima in the energy landscape. We use this strategy to map the low-energy crystal structures of Li, Na, Mg, and Al at zero pressure. For Li and Na, our searching finds numerous close-packed polytypes of almost-equal energy, consistent with previous efforts to understand their low-temperature forms. For Mg and Al, the searching identifies the expected ground state structures unambiguously, in addition to revealing other low-energy structures. This new role for orbital-free density functional theory-particularly as continued advances make it accurate for more of the periodic table-will expedite crystal structure prediction over wide ranges of compositions and pressures.
The properties of a material depend on how its atoms are arranged, and predicting these arrangements from first principles is a longstanding challenge. Orbital-free density functional theory provides a quantum-mechanical model based solely on the electron density, not individual wave functions. The resulting speedups make it attractive for random structure searching, whereby random configurations of atoms are relaxed to local minima in the energy landscape. We use this strategy to map the low-energy crystal structures of Li, Na, Mg, and Al at zero pressure. For Li and Na, our searching finds numerous close-packed polytypes of almost-equal energy, consistent with previous efforts to understand their low-temperature forms. For Mg and Al, the searching identifies the expected ground state structures unambiguously, in addition to revealing other low-energy structures. This new role for orbital-free density functional theory-particularly as continued advances make it accurate for more of the periodic table-will expedite crystal structure prediction over wide ranges of compositions and pressures.
Materials physicists
have long sought efficient methods for predicting
the structures of atoms in materials. The field can now claim many
successes,[1−3] propelled by steady increases in computing power.
One fruitful strategy combines density functional theory (DFT)[4−7] and random structure searching.[1,8] The former
provides reliable estimates of the energy (or enthalpy) of an arrangement
of atoms, while the latter explores possible configurations. The procedure
begins with randomly generated structures, perhaps having preselected
symmetries or constrained by simple heuristics, which are then relaxed
to local minima (or stationary points) in the energy landscape. This
approach, while pragmatic and effective, is limited by the computational
expense of conventional Kohn–Sham density functional theory
(KSDFT).[5] For example, metals requiring
dense Brillouin zone sampling pose a challenge because poor sampling
leads to overly rugged landscapes. Faster DFT calculations would facilitate
study of numerous materials of practical interest, such as complex
phases of intermetallic alloys.Orbital-free density functional
theory (OFDFT)[9−12] achieves large speedups over
orbital-based KSDFT. Accordingly, for a fixed computational resource
and time period, OFDFT can drive more geometry optimizations than
KSDFT, even if the systems are relatively small, accelerating the
overall structure searching task. In principle, the methods are equally
rigorous, but in practice OFDFT is typically less accurate. At present,
OFDFT achieves near-KSDFT accuracy only for free-electron-like metals
and some semiconductors, but new advances continue to widen its applicability.
Importantly, to succeed in random structure searching, OFDFT need
only locate the most relevant structures. The results
of such a search are easily validated and refined.
Methods
To find a system’s ground state with OFDFT, one expresses
all energy contributions as functionals of the electron density and
then varies the density to minimize the total energy.[13,14] Conventional KSDFT is similar, except the noninteracting kinetic
energy, T, is calculated
from the Kohn–Sham orbitals, not with a density
functional. Therefore, for OFDFT to achieve results that agree with
the orbital-based approach, the first requirement is an accurate density
functional approximation of the form T[n].A second potential source
of error for OFDFT enters when pseudopotentials
are used to represent core electrons and nuclei. OFDFT requires strictly
local pseudopotentials since nonlocal pseudopotentials rely on orbital
information. This restriction is not severe for free-electron-like
metals, as we demonstrate below.To conduct OFDFT-driven random
structure searching, we relaxed
1000 random structures for each of Li, Na, Mg, and Al. We produced
the initial structures with the AIRSS software,[1,8] constraining
the initial unit cells to have volumes within 5% of the expected equilibrium
volumes (see below for more details). The structural relaxations were
challenging tests for OFDFT, requiring it to perform reliably for
many diverse configurations drawn from across the corresponding energy
landscapes.In the rest of this section, we provide theoretical
and computational
details, including modifications to established kinetic energy functionals
that improve their robustness for random search. Readers uninterested
in these details may skip directly to the Results
and Discussion, where we analyze the outcomes of the structure
searching.
Approximating the Kinetic Energy with a Density Functional
We begin by expressing the noninteracting kinetic energy in the
form of a sumwhere the first term is
the Weizsäcker
kinetic energy,[15]which is exact for single-orbital
systems. The second term is the excess Pauli kinetic energy,[16,17] expressed as the product of the Thomas-Fermi kinetic energy,[18,19]T, and an enhancement
factor, f(X). The Thomas–Fermi
functional, which is exact for a free electron gas, iswith c0 = (3/10)(3π2)2/3. The Pauli kinetic energy is always nonnegative,
and it is typically nonzero as a consequence of the Pauli Exclusion
Principle.A few preliminary comments on the enhancement factor
function f(x) are appropriate. First,
if f(x) is invertible, then eq can be considered exact,
with the functional X defined as X = f–1([T – T]/T). For a given invertible f(x), one is left to approximate X.Second, the choice f(x) = 1 + x allows recovery of an important class
of interrelated
kinetic energy functionals used widely for materials research, including
those of Wang and Teter;[20] Perrot;[21] Smargiassi and Madden;[22] and Wang, Govind, and Carter.[23] However,
these Wang–Teter-style approximations can violate the T ≥ T constraint, at times to catastrophic
effect. In fact, Blanc and Cancès showed that such approximations
are unbounded from below,[24] providing a
mathematical origin for instabilities observed in practice. Therefore,
because T is nonnegative,
strict imposition of T ≥ T would have
a stabilizing effect.Finally, by judicious choice of f(x), one may devise new approximations
that reduce to the original
Wang–Teter-style functionals when appropriate, but also obey
the T ≥ T constraint. The nonnegative
function f(x) = e is especially suitable because e ≈ 1 + x when x is small. We adopt this choice throughout,
but it is far from the only possibility. The exponential-stabilized
functionals facilitate the geometry optimizations required for random
structure searching, while retaining the best features of the original
approximations.
Approximating X[n]
Drawing on the earlier work,[20−23] we approximate X[n] asThe form of the weight function, K(n0, |r|) is deduced
below; for now, we specify only that it depends on a uniform electron
density n0 and a distance between points
in space. For crystals, amorphous solids, and liquids, there is a
natural choice for n0, the average electron
density, which we adopt throughout. For other systems with regions
of vacuum, more care is required when choosing n0.For the limiting case of a free electron gas, the
second derivative
of T is known in analytical
form from perturbation theory:[25]where denotes inverse
Fourier transformation, k0 = (3π2n0)1/3, η = k/(2k0), k is
the length of the reciprocal
space vector k, andIt proves useful to incorporate the
condition of eq into
approximate density functionals,
particularly for nearly free-electron metals. This information is
sufficient for determining the weight function in eq :Importantly, if f′(0) = 1, then the weight
function in eq reduces
to the “density-independent” weight function from ref (23).We are now able
to fully specify the Wang–Teter, Perrot,
Smargiassi–Madden, and Wang–Govind–Carter functionals
in our notation: they are defined by eqs , 4, and 7, with f(x) = 1 + x and different choices for α and β. For the Wang–Teter
functional, α = β = 5/6, as inspired by the Thomas–Fermi
functional; for the Perrot functional, α = β = 1, exactly
as in perturbation theory; for the Smargiassi–Madden functional,
α = β = 1/2, producing the correct semiclassical behavior
for the slowly varying limit; and, for the Wang–Govind–Carter
functional, , yielding correct asymptotic behavior for
both the slowly varying and rapidly varying limits. These properties
do not necessarily carry over to the exponential-stabilized functionals.
Kinetic Potential and Kinetic Stress
The kinetic potential
for the approximation defined by eqs , 4, and 7 iswith δT/δn(r) = −(1/2)(∇2n1/2)/n1/2 and δT/δn(r) = (5/3)c0n2/3. The associated contribution to the
stress tensor iswhere Ω is the cell
volume, δ is the Kronecker delta, , [σ]=–2/(3Ω)Tδ, the {k} are the reciprocal
lattice vectors, andThe terms in curly braces in eq are necessary if n0 is set to
the average electron density (and
therefore adjusts as the cell is stretched infinitesimally), but should
be omitted if n0 is treated as a fixed
external parameter. If f(x) = 1
+ x, eq is equivalent to the associated formulas given in ref (14).
Other Approximations
Our choice of functional for the
noninteracting kinetic energy was motivated by pragmatism: we began
with a form known to perform well for nearly free-electron metals
and generalized it to enforce nonnegativity in the Pauli kinetic energy.
This approximation encodes sufficient physics for accurate treatment
of the low-energy structures (and suitably robust treatment of higher-energy
structures) of Li, Na, Mg, and Al, all while retaining computational
efficiency.However, kinetic energy functional development is
an active area of research,[26−32] and numerous approximate functionals, having various desirable features,
are available.[9−12] Some, like ours, enforce the T ≥ T constraint
by construction.[28,33−35] Others would
perform better than ours for semiconductors.[36−38] A few recent
papers have even utilized randomly generated crystal structures or
clusters, but without relaxation, to assess the performance of new
kinetic energy functionals.[29,31,32] For future OFDFT-driven random structure searching, it will be advantageous
to adopt some of these many approximations.
Computational
Details
We used the AIRSS package[1,8] to
generate the initial
structures, producing 1000 random structures for each of Li, Na, Mg,
and Al. Each structure had between 3 and 12 atoms, and we generated
100 of each size. We constrained the initial unit cells to have volumes
within 50% of 19.7, 35.9, 22.0, and 15.6 Å3/atom for
Li, Na, Mg, and Al, respectively, and to have minimum distances between
atoms of 1.5 Å.We conducted both OFDFT and KSDFT calculations,
with the latter
serving to validate and refine predictions of the former. In all results
reported in the main paper, we employed the Perdew–Burke–Ernzerhof
(PBE) generalized gradient approximation[39] to account for electronic exchange and correlation. In the Supporting Information, we provide some analogous
results obtained with the local density approximation (LDA)[40] and PBEsol[41] functionals.
Computational settings were chosen to converge predicted energies
to within 1 meV/atom.We completed the OFDFT calculations with
a new version of the PROFESS
code,[14,42,43] using the
local pseudopotentials for Li, Na, Mg, and Al reported in refs (44, 45, 46, and 46), respectively. For structure
searching, we used a plane wave cutoff of 800 eV for the electron
density; for all other OFDFT calculations, we used 2000 eV. Because
of the demands of random search, we coupled PROFESS to the Atomic
Simulation Environment[47] to make use of
the latter’s superior geometry optimization tools. To minimize
forces and stresses, we used the BFGS with line search option with
the ExpCellFilter feature for simultaneous variation of the cell and
ion degrees of freedom (see ref (48) for details of the method). We restarted the
minimization every 3 steps for 3 iterations, then every 20 steps until
convergence—the restarts allow the grid shape to adjust to
changes in the cell shape. Even with the exponential-stabilized kinetic
energy functionals, some structure optimizations still failed, typically
because the cell became extremely skewed or because the crystal began
to dissociate. These failures are not especially consequential—they
occur in KSDFT-driven random structure searching too, although less
frequently—and the candidate structures are simply rejected.We performed the KSDFT calculations with CASTEP,[49] using either the local pseudopotentials mentioned previously
or the C19 set of ultrasoft nonlocal pseudopotentials. The latter
are presumed more accurate. Each calculation used a plane wave cutoff
for the orbitals of 1000 eV and Brillouin zone sampling with Monkhorst–Pack[50] grids having maximum distance between k-points of 2π × 0.015 Å–1. The CASTEP geometry optimizations used the default LBFGS method.
Testing
the Modified Kinetic Energy Functionals
For
benchmarking, we used OFDFT and KSDFT to predict the equilibrium volumes,
relative energies, and bulk moduli for the body-centered cubic (bcc),
cubic diamond (cd), face-centered cubic (fcc), hexagonal close-packed
(hcp), and simple cubic (sc) structures. The relative energies appear
in Table and the
remaining data are in Tables S1 and S2 in
the Supporting Information. Each table contains eight columns of OFDFT
predictions generated with the four Wang–Teter-style functionals
and their exponential-stabilized forms. They also contain KSDFT predictions
in columns labeled KS-L and KS-NL for local and nonlocal pseudopotentials,
respectively. Good agreement between the OFDFT columns and the KS-L
column indicates that the kinetic energy functional is suitable, whereas
good agreement between the KS-L and the KS-NL columns indicates that
the local pseudopotential is suitable.
Table 1
Relative
Energies (meV/atom) for Several
Elements and Crystal Structures as Predicted by OFDFT Using Local
Pseudopotentials and Eight Variations of the Same Kinetic Energy Functional
(Wang–Teter, Perrot, Smargiassi–Madden, and Wang–Govind–Carter,
along with Their Exponential-Stabilized Forms) and as Predicted by
KSDFT Using both Local Pseudopotentials (KS-L) and Nonlocal Pseudopotentials
(KS-NL)a
Li
WT
WT-e
P
P-e
SM
SM-e
WGC
WGC-e
KS-L
KS-NL
fcc
0
0
0
0
0
0
0
0
0
0
hcp
0
0
0
0
0
0
0
0
0
0
bcc
1
1
1
1
1
1
1
1
1
2
sc
151
151
150
149
156
155
151
151
152
120
cd
429
432
426
429
437
441
429
432
428
516
OFDFT estimates differing from
the corresponding KS-L energy by more than 10 meV/atom are italicized.
OFDFT estimates differing from
the corresponding KS-L energy by more than 10 meV/atom are italicized.The most important pattern
in the relative energies (Table ) is that the phase orderings
are correct for all cases. For Li and Na, the various methods yield
essentially identical predictions for the denser, lower-energy structures
(bcc, fcc, and hcp), while, for the more open structures (cd and sc),
the OFDFT and KS-L predictions agree to within a few meV/atom and
differ by slightly more from the KS-NL predictions. A somewhat similar
pattern is apparent for Mg and Al, although there is more variation
in the OFDFT data. In a few cases (particularly for some rather unphysical
open structures of Al), the exponential-stabilized functionals yield
notably less accurate energies than their counterparts, but the origin
of this result is unclear. In general, the relative energies predicted
by the stabilized functionals are greater than or equal to those for
the corresponding original functionals (and never more than 2 meV/atom
less than those for the original functionals), likely because the
former enforce the lower bound on the Pauli kinetic energy whereas
the latter do not.One unusual feature of the results in Tables , S1, and S2 is the absence of data
in the Perrot columns
for the cd structure of Al. The explanation is clear from Figure : for the original
Perrot functional, the total energy curve has no minimum as a function
of volume, partly because the Pauli kinetic energy becomes unphysically
negative. In contrast, the exponential-stabilized Perrot functional
yields a total energy curve with the expected shape. This example
illustrates a general point. Although the other Wang–Teter-style
functionals exhibit more sensible behavior for this case, they are
still susceptible to the instabilities outlined by Blanc and Cancès.
Exponential stabilization resolves this issue by enforcing nonnegativity
of the Pauli kinetic energy.
Figure 1
For the original and exponential-stabilized
Perrot functionals:
total energy (top) and Pauli kinetic energy (bottom) as a function
of volume for Al in the diamond structure. The total energy curve
for the original functional has no minimum, in part because of negative
Pauli kinetic energies for large volumes. The exponential-stabilized
functional correctly enforces nonnegativity of the Pauli kinetic energy,
and it does yield a minimum in the total energy. Clearly the latter
would be more stable for random structure searching.
For the original and exponential-stabilized
Perrot functionals:
total energy (top) and Pauli kinetic energy (bottom) as a function
of volume for Al in the diamond structure. The total energy curve
for the original functional has no minimum, in part because of negative
Pauli kinetic energies for large volumes. The exponential-stabilized
functional correctly enforces nonnegativity of the Pauli kinetic energy,
and it does yield a minimum in the total energy. Clearly the latter
would be more stable for random structure searching.The main message of these benchmarks is that both the original
and the exponential-stabilized approximations, for all four Wang–Teter-style
functionals, yield nearly identical predictions for the denser, lower-energy
structures we would expect to find during structure searching. Ultimately,
we chose the exponential-stabilized functional with Wang–Govind–Carter
exponents () to obtain our main results.
Results and Discussion
The structure searching yielded geometries and energies of 1000
locally stable structures for each of Li, Na, Mg, and Al. To analyze
these data, we began by finding primitive cells for all structures.
We then generated the corresponding Smooth Overlap of Atomic Positions
(SOAP)[51] descriptors, characterizing each
structure as a vector in a high-dimensional space (see the Supporting Information for details).[52] Finally, we applied the dimensionality reduction
method Stochastic Hyperspace Embedding And Projection (SHEAP) to produce
two-dimensional visualizations of the structural data.[75] In these SHEAP maps (see Figures –5), individual
structures are represented by circles colored according to structure
energy, with areas proportional to number of occurrences in the search.
The axes do not have a predetermined physical interpretation, but
the relative positioning and clustering across the two-dimensional
space reveals structural relationships. (We also produced three-dimensional
SHEAP visualizations for each element, but found no added benefit
for these data sets—see the Supporting Information.)
Figure 2
Two-dimensional visualization (bottom) of the 1000 locally
stable
Li structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.
Figure 5
Two-dimensional visualization (bottom)
of the 1000 locally stable
Al structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.
Two-dimensional visualization (bottom) of the 1000 locally
stable
Li structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.Before remarking on the
four elements separately, we note one common
characteristic: their SHEAP maps all have a region of close-packed
structures with fcc at one end and hcp at the other. Between these
end points lie other close-packed polytypes (or distortions thereof)
having close-packed planes stacked in increasingly complex sequences.[53,54] In conventional ABC notation, fcc stacking is denoted ABC ABC···,
while hcp stacking is AB AB···; however, this notation
becomes burdensome in other cases. A compact hc notation
is more suitable,[53,54] in which hcp is represented by h because each layer has hcp-like stacking (identical layers
above and below), and fcc is represented by c because
each layer has fcc-like stacking (distinct layers above and below).
The double hexagonal close-packed (dhcp) structure is then hc (replacing ABCB···), and the 9R structure
becomes hhc (replacing ABACACBCB···).
Importantly, consistent with intuition, close-packed polytypes that
are clearly hcp-like, such as hhhhc, are found near
hcp in the SHEAP maps of Figures –5, whereas those that
are more fcc-like, such as hchcc, appear near fcc.Figures –5 also assess the accuracy of the OFDFT predictions.
Beginning with a representative subset of low-energy structures for
each element, we rerelaxed each one according to the following protocol.
(To obtain the subsets of structures, we used the analysis tools provided
with the AIRSS software. We generated a set of distinct candidates
with the command “ca -u 0.2 -r” and then eliminated
those with energies greater than 50 meV/atom from the lowest-energy
structure. The details of the algorithm are not essential, only that
it yields an unbiased subset.)Convert the primitive cell to its associated
conventional cell. (Some primitive cells had skewed cell shapes that
inhibited very careful relaxation.)Rerelax the conventional cell with
OFDFT, without symmetry constraints and using the higher plane wave
cutoff. Discard the structure if it transforms significantly. (Only
one structure was discarded in this manner, a rather high-energy Li
structure that proved unstable.)Rerelax the original conventional cell
using KSDFT and the local pseudopotential, preserving the symmetry
operations during the relaxation.Repeat the previous step but with the
corresponding nonlocal pseudopotential.All together, the results of this procedure (Figures –5) establish
that OFDFT, while not perfect, yields predictions in basic agreement
with KSDFT for the wide range of structures located during random
structure searching. These results also help disaggregate error attributable
to the local pseudopotential from error attributable to the kinetic
energy functional.Finally, in the Supporting Information, we show the results of repeating the fourth step
in the previous
paragraph using the LDA and PBEsol exchange-correlation functionals
(the latter is especially appropriate for densely packed solids).
The relative energies derived with the LDA, PBE, and PBEsol approximations
are almost indistinguishable, increasing trust in the predictions.
Lithium
The most striking results for Li (Figure ) are the numerous
close-packed polytypes having low energies all within a band of 1
meV/atom, including fcc, hcp, and 9R, as well as more complex layerings
like hhcc, hchcc, and hhhhc. Interestingly, we also located the dhcp structure a small number
of times; Hutcheon and Needs, who recently performed a smaller KSDFT-driven
search for Li, remarked that dhcp was notably absent from their results.[55] Lithium’s room temperature structure,
bcc, is also prominent in the Li SHEAP map; it becomes thermodynamically
stabilized over fcc, hcp, and 9R at temperatures above roughly 160,
130, and 70 K, respectively.[56]The
low-temperature polytypism in Li is well-known and has been the subject
of some uncertainty.[55−60] In our calculations, several of the candidate structures differ
by only tens of μeV/atom, well below our convergence threshold
of 1 meV/atom. In fact, only recently was fcc established as the true
ground state.[56] Before then, other polytypes,
particularly the 9R structure,[61] were thought
to be more favorable. One explanation is kinetics:[56] the bcc–fcc transition at low pressure is kinetically
hindered, and isobaric experiments tend to yield the 9R structure
upon temperature lowering.[61,62] However, Ackland et
al. showed, with careful calculations accounting for nuclear quantum
effects, that fcc is indeed the true thermodynamic ground state, and
they synthesized fcc Li at low pressure and temperature via a different
pressure–temperature pathway (decompression).[56] All together, the near energetic degeneracy of the close-packed
polytypes and the unusual flatness of the associated energy landscape
suggest the metal will be mechanically soft and prone to plastic deformation.[63]Finally, the agreement between the OFDFT
and KSDFT predictions
for Li (Figure , top)
is strong. We would not expect OFDFT to resolve perfectly the tiny
energy differences between close-packed phases; even our KSDFT calculations
likely have errors of some μeV/atom. However, OFDFT is clearly
able to resolve energy differences nearer 1 meV/atom, evidenced by
its correct prediction for bcc. To quantify how well OFDFT orders
the structures by energy, we compute Spearman rank-order correlations
between the OFDFT energies and the two varieties of KSDFT energies.
A Spearman correlation of one indicates perfect agreement in the ranking
of structures, while a value of zero indicates no association. The
results are 0.82 and 0.79 when OFDFT is compared with KSDFT with local
and nonlocal pseudopotentials, respectively. If all but one of the
close-packed variations are omitted, acknowledging the near degeneracies
and the limitations of our convergence criteria, the rank-order correlations
improve to 1.00 and 0.98.
Sodium
The results for Na (Figure ) are somewhat similar
to those for Li. The
search yielded several close-packed polytypes differing by less than
1 meV/atom in energy, and the bcc structure, which is observed at
room temperature, was found most frequently. However, the results
also suggest that Na is more prone to small distortions of the close-packed
motif. For example, the hcp structure and the two-atom Cmcm structure adjacent to it on the SHEAP map were located equally often,
and the latter is a slight orthorhombic distortion of the former.
Such structures have been hypothesized to explain the diffraction
pattern observed when Na is cooled from room temperature.[64] The fact that the Cmcm structure
lies between bcc and hcp on the SHEAP map is consistent with this
interpretation.
Figure 3
Two-dimensional visualization (bottom) of the 1000 locally
stable
Na structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.
Two-dimensional visualization (bottom) of the 1000 locally
stable
Na structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.To the best of our knowledge,
the true thermodynamic ground state
of Na has not been determined unequivocally,[64−71] and our calculations do not resolve this issue. Nevertheless, its
flat energy landscape, like that of Li, suggests that Na metal will
be mechanically soft and will exhibit fluidlike deformation behavior.[63]Finally, the OFDFT performance (Figure , top) was excellent
for Na. The Spearman
rank-order correlation between the OFDFT predictions and the KSDFT
predictions (with both local and nonlocal pseudopotentials) is 0.99.
Magnesium
The results for Mg (Figure ) are more straightforward than those for
Li and Na. The lowest-energy structure is clearly hcp, which is also
the structure observed at room temperature. It was found more often
than any other closed-packed structure in the search. Related structures
like hhhhc are roughly 1 meV/atom higher in energy,
intermediate close-packed structures like hhcc are
a few meV/atom higher in energy, and the fcc structure is a full 10
meV/atom higher in energy than hcp. Notably, bcc is absent from the
Mg SHEAP map, consistent with prior observations that bcc Mg is unstable.[63,72] However, the I4/mmm structure
that was found a large number of times has body-centered tetragonal
geometry with c/a ratio 1.34, between that of bcc (1.00) and fcc (1.41).
Figure 4
Two-dimensional
visualization (bottom) of the 1000 locally stable
Mg structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.
Two-dimensional
visualization (bottom) of the 1000 locally stable
Mg structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.The OFDFT performance
(Figure , top) was
very good for Mg. The Spearman rank-order
correlations between the OFDFT energies and those computed with KSDFT
with local and nonlocal pseudopotentials are 0.99 and 0.98, respectively.
Aluminum
The results for Al (Figure ) are also fairly
straightforward. The room-temperature fcc
structure is the unambiguous ground state with a very high frequency
of occurrence. Numerous close-packed polytypes appear, with the hcc (triple hcp) and hchcc structures slightly
higher in energy than fcc, and others higher still. One interesting
feature is the 11-atom P1̅ structure lying near fcc in the SHEAP
map; it relaxed into fcc during the secondary optimization using KSDFT
with the nonlocal pseudopotential.Two-dimensional visualization (bottom)
of the 1000 locally stable
Al structures obtained with OFDFT-driven random structure searching,
showing the results of a SHEAP dimensionality reduction based on SOAP
descriptors for the structures. Circle size indicates frequency of
occurrence, and circle color conveys structure energy. Select structures
are labeled with common names (in bold), with hc notation
for close-packed polytypes, or with a space group paired with the
number of atoms in the primitive cell. Relative energies (top) of
a subset of structures computed with OFDFT (OF) and KSDFT with local
or nonlocal pseudopotentials (KS-L and KS-NL, respectively). Dashed
lines, where visible, show the energy for the initial structure, and
solid lines show the energy after a second relaxation of the associated
conventional cell.The spread between the
OFDFT and the KSDFT energies (Figure , top) is greater for Al than
for the other elements (although, on a per electron basis, the Al
results resemble the others). Nevertheless, the OFDFT energy ordering
remains mostly correct, and the Spearman rank-order correlations are
0.95 and 0.81, respectively, between the OFDFT predictions and the
KSDFT energies with local and nonlocal pseudopotentials. If the unstable
P1̅ structure is omitted, both correlations improve to 0.97.
Conclusions
The random structure searching approach to structure
prediction
is simple and general. To succeed, it requires little more than a
robust, computationally efficient method for determining the enthalpy
of a candidate structure. In this work, we established that OFDFT
can serve this purpose, paving the way for future searches that are
larger and more wide-ranging than feasible with conventional KSDFT.
Importantly, while OFDFT proved accurate for the free-electron-like
metals we considered—and less expensive than KSDFT, which would
have required dense Brillouin zone sampling—it need not yield
perfect predictions to excel as an engine for random structure searching.
The key attribute is broad-based reliability: if OFDFT correctly identifies
the salient basins in an energy landscape, it succeeds. Refinement
of results with KSDFT adds little extra cost.Our searching
explored the landscapes of Li, Na, Mg, and Al at
zero pressure. For Li and Na, the striking results were the many close-packed
structures of nearly identical energy. These findings—bolstered
by the fact that their room-temperature structure, bcc, is higher
in energy by only one or two meV/atom—suggest mechanical softness
and ease of plastic deformation. By contrast, the searching for Mg
and Al revealed more definitive low-temperature ground state structures,
identical with those observed at room temperature. Importantly, the
bcc structure was not found for Mg or Al, consistent
with calculations suggesting it would be unstable.Looking ahead,
we anticipate a mutually beneficial relationship
between OFDFT and random structure searching, just as the latter has
strengthened machine-learned interatomic potentials.[73,74] Where OFDFT is presently accurate, its low cost will enable structure
searching over wide ranges of compositions and pressures. At the same
time, the demands of random search will spur new developments in OFDFT.
During kinetic energy functional or local pseudopotential construction,
a common workflow involves preselecting a modest set of structures
for benchmarking, exactly as we did in the Methods. However, this philosophy is imperfect, or at least incomplete—what
if the chosen structures are not the most relevant ones? The stochastic
nature, exploratory qualities, and comprehensiveness of random structure
searching make it a harsh but fruitful test.
Authors: Ask Hjorth Larsen; Jens Jørgen Mortensen; Jakob Blomqvist; Ivano E Castelli; Rune Christensen; Marcin Dułak; Jesper Friis; Michael N Groves; Bjørk Hammer; Cory Hargus; Eric D Hermes; Paul C Jennings; Peter Bjerre Jensen; James Kermode; John R Kitchin; Esben Leonhard Kolsbjerg; Joseph Kubal; Kristen Kaasbjerg; Steen Lysgaard; Jón Bergmann Maronsson; Tristan Maxson; Thomas Olsen; Lars Pastewka; Andrew Peterson; Carsten Rostgaard; Jakob Schiøtz; Ole Schütt; Mikkel Strange; Kristian S Thygesen; Tejs Vegge; Lasse Vilhelmsen; Michael Walter; Zhenhua Zeng; Karsten W Jacobsen Journal: J Phys Condens Matter Date: 2017-03-21 Impact factor: 2.333
Authors: Sabri F Elatresh; Weizhao Cai; N W Ashcroft; Roald Hoffmann; Shanti Deemyad; Stanimir A Bonev Journal: Proc Natl Acad Sci U S A Date: 2017-05-10 Impact factor: 11.205
Authors: Sabri F Elatresh; Weizhao Cai; N W Ashcroft; Roald Hoffmann; Shanti Deemyad; Stanimir A Bonev Journal: Proc Natl Acad Sci U S A Date: 2017-10-10 Impact factor: 11.205
Authors: Lívia B Pártay; Christoph Ortner; Albert P Bartók; Chris J Pickard; Gábor Csányi Journal: Phys Chem Chem Phys Date: 2017-07-26 Impact factor: 3.676