Literature DB >> 33585233

Minimal Residual Disease Detection by Next-Generation Sequencing in Multiple Myeloma: A Comparison With Real-Time Quantitative PCR.

Qiumei Yao1, Yinlei Bai2, Shaji Kumar3, Elaine Au4, Alberto Orfao5, Chor Sang Chim1.   

Abstract

Here we compared clonotype identification by allele-specific oligonucleotide real-time quantitative-PCR (ASO RQ-PCR) and next-generation sequencing (NGS) in 80 multiple myeloma patients. ASO RQ-PCR was applicable in 49/55 (89%) and NGS in 62/78 (80%). Clonotypes identified by both methods were identical in 33/35 (94%). Sensitivity of 10-5 was confirmed in 28/29 (96%) by NGS while sensitivity of RQ-PCR was 10-5 in 7 (24%), 5 × 10-5 in 15 (52%), and 10-4 in 7 (24%). Among 14 samples quantifiable by ASO RQ-PCR, NGS yielded comparable results in 12 (86%). Applicability of NGS can be improved if immunoglobulin heavy-chain incomplete DJ primers are included.
Copyright © 2021 Yao, Bai, Kumar, Au, Orfao and Chim.

Entities:  

Keywords:  allele-specific oligonucleotide real-time quantitative-PCR; minimal residual disease; multiple myeloma; next-generation sequencing; sensitivity

Year:  2021        PMID: 33585233      PMCID: PMC7878533          DOI: 10.3389/fonc.2020.611021

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   6.244


  12 in total

1.  Long-term results of the GIMEMA VEL-03-096 trial in MM patients receiving VTD consolidation after ASCT: MRD kinetics' impact on survival.

Authors:  S Ferrero; M Ladetto; D Drandi; F Cavallo; E Genuardi; M Urbano; S Caltagirone; M Grasso; F Rossini; T Guglielmelli; C Cangialosi; A M Liberati; V Callea; T Carovita; C Crippa; L De Rosa; F Pisani; A P Falcone; P Pregno; S Oliva; C Terragna; P Musto; R Passera; M Boccadoro; A Palumbo
Journal:  Leukemia       Date:  2014-07-16       Impact factor: 11.528

2.  Next-generation sequencing indicates false-positive MRD results and better predicts prognosis after SCT in patients with childhood ALL.

Authors:  M Kotrova; V H J van der Velden; J J M van Dongen; R Formankova; P Sedlacek; M Brüggemann; J Zuna; J Stary; J Trka; E Fronkova
Journal:  Bone Marrow Transplant       Date:  2017-02-27       Impact factor: 5.483

Review 3.  Molecular detection of minimal residual disease in multiple myeloma.

Authors:  Yinlei Bai; Alberto Orfao; Chor Sang Chim
Journal:  Br J Haematol       Date:  2017-12-19       Impact factor: 6.998

4.  Analysis of minimal residual disease by Ig/TCR gene rearrangements: guidelines for interpretation of real-time quantitative PCR data.

Authors:  V H J van der Velden; G Cazzaniga; A Schrauder; J Hancock; P Bader; E R Panzer-Grumayer; T Flohr; R Sutton; H Cave; H O Madsen; J M Cayuela; J Trka; C Eckert; L Foroni; U Zur Stadt; K Beldjord; T Raff; C E van der Schoot; J J M van Dongen
Journal:  Leukemia       Date:  2007-02-08       Impact factor: 11.528

5.  Upgraded Standardized Minimal Residual Disease Detection by Next-Generation Sequencing in Multiple Myeloma.

Authors:  Qiumei Yao; Yinlei Bai; Alberto Orfao; Shaji Kumar; Chor S Chim
Journal:  J Mol Diagn       Date:  2020-03-06       Impact factor: 5.568

6.  Next-generation sequencing and real-time quantitative PCR for minimal residual disease detection in B-cell disorders.

Authors:  M Ladetto; M Brüggemann; L Monitillo; S Ferrero; F Pepin; D Drandi; D Barbero; A Palumbo; R Passera; M Boccadoro; M Ritgen; N Gökbuget; J Zheng; V Carlton; H Trautmann; M Faham; C Pott
Journal:  Leukemia       Date:  2013-12-17       Impact factor: 11.528

7.  Prognostic value of deep sequencing method for minimal residual disease detection in multiple myeloma.

Authors:  Joaquin Martinez-Lopez; Juan J Lahuerta; François Pepin; Marcos González; Santiago Barrio; Rosa Ayala; Noemí Puig; María A Montalban; Bruno Paiva; Li Weng; Cristina Jiménez; María Sopena; Martin Moorhead; Teresa Cedena; Immaculada Rapado; María Victoria Mateos; Laura Rosiñol; Albert Oriol; María J Blanchard; Rafael Martínez; Joan Bladé; Jesús San Miguel; Malek Faham; Ramón García-Sanz
Journal:  Blood       Date:  2014-03-19       Impact factor: 22.113

8.  Standardized Minimal Residual Disease Detection by Next-Generation Sequencing in Multiple Myeloma.

Authors:  Qiumei Yao; Yinlei Bai; Alberto Orfao; Chor Sang Chim
Journal:  Front Oncol       Date:  2019-06-06       Impact factor: 6.244

9.  Quality control and quantification in IG/TR next-generation sequencing marker identification: protocols and bioinformatic functionalities by EuroClonality-NGS.

Authors:  Henrik Knecht; Tomas Reigl; Michaela Kotrová; Franziska Appelt; Peter Stewart; Vojtech Bystry; Adam Krejci; Andrea Grioni; Karol Pal; Kamila Stranska; Karla Plevova; Jos Rijntjes; Simona Songia; Michael Svatoň; Eva Froňková; Jack Bartram; Blanca Scheijen; Dietrich Herrmann; Ramón García-Sanz; Jeremy Hancock; John Moppett; Jacques J M van Dongen; Giovanni Cazzaniga; Frédéric Davi; Patricia J T A Groenen; Michael Hummel; Elizabeth A Macintyre; Kostas Stamatopoulos; Jan Trka; Anton W Langerak; David Gonzalez; Christiane Pott; Monika Brüggemann; Nikos Darzentas
Journal:  Leukemia       Date:  2019-06-21       Impact factor: 11.528

10.  Standardized next-generation sequencing of immunoglobulin and T-cell receptor gene recombinations for MRD marker identification in acute lymphoblastic leukaemia; a EuroClonality-NGS validation study.

Authors:  Monika Brüggemann; Michaela Kotrová; Henrik Knecht; Jack Bartram; Myriam Boudjogrha; Vojtech Bystry; Grazia Fazio; Eva Froňková; Mathieu Giraud; Andrea Grioni; Jeremy Hancock; Dietrich Herrmann; Cristina Jiménez; Adam Krejci; John Moppett; Tomas Reigl; Mikael Salson; Blanca Scheijen; Martin Schwarz; Simona Songia; Michael Svaton; Jacques J M van Dongen; Patrick Villarese; Stephanie Wakeman; Gary Wright; Giovanni Cazzaniga; Frédéric Davi; Ramón García-Sanz; David Gonzalez; Patricia J T A Groenen; Michael Hummel; Elizabeth A Macintyre; Kostas Stamatopoulos; Christiane Pott; Jan Trka; Nikos Darzentas; Anton W Langerak
Journal:  Leukemia       Date:  2019-06-26       Impact factor: 11.528

View more
  1 in total

1.  Prognostic Significance of the Stage at Which an MRD-Negative Status Is Achieved for Patients With Multiple Myeloma Who Received ASCT.

Authors:  Qian Sun; Xiaozhe Li; Jingli Gu; Beihui Huang; Junru Liu; Meilan Chen; Juan Li
Journal:  Front Oncol       Date:  2022-05-18       Impact factor: 5.738

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.