| Literature DB >> 33585233 |
Qiumei Yao1, Yinlei Bai2, Shaji Kumar3, Elaine Au4, Alberto Orfao5, Chor Sang Chim1.
Abstract
Here we compared clonotype identification by allele-specific oligonucleotide real-time quantitative-PCR (ASO RQ-PCR) and next-generation sequencing (NGS) in 80 multiple myeloma patients. ASO RQ-PCR was applicable in 49/55 (89%) and NGS in 62/78 (80%). Clonotypes identified by both methods were identical in 33/35 (94%). Sensitivity of 10-5 was confirmed in 28/29 (96%) by NGS while sensitivity of RQ-PCR was 10-5 in 7 (24%), 5 × 10-5 in 15 (52%), and 10-4 in 7 (24%). Among 14 samples quantifiable by ASO RQ-PCR, NGS yielded comparable results in 12 (86%). Applicability of NGS can be improved if immunoglobulin heavy-chain incomplete DJ primers are included.Entities:
Keywords: allele-specific oligonucleotide real-time quantitative-PCR; minimal residual disease; multiple myeloma; next-generation sequencing; sensitivity
Year: 2021 PMID: 33585233 PMCID: PMC7878533 DOI: 10.3389/fonc.2020.611021
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244