Literature DB >> 33584830

The Role of the U5 snRNP in Genetic Disorders and Cancer.

Katherine A Wood1,2, Megan A Eadsforth1, William G Newman1,2, Raymond T O'Keefe1.   

Abstract

Pre-mRNA splicing is performed by the spliceosome, a dynamic macromolecular complex consisting of five small uridine-rich ribonucleoprotein complexes (the U1, U2, U4, U5, and U6 snRNPs) and numerous auxiliary splicing factors. A plethora of human disorders are caused by genetic variants affecting the function and/or expression of splicing factors, including the core snRNP proteins. Variants in the genes encoding proteins of the U5 snRNP cause two distinct and tissue-specific human disease phenotypes - variants in PRPF6, PRPF8, and SNRP200 are associated with retinitis pigmentosa (RP), while variants in EFTUD2 and TXNL4A cause the craniofacial disorders mandibulofacial dysostosis Guion-Almeida type (MFDGA) and Burn-McKeown syndrome (BMKS), respectively. Furthermore, recurrent somatic mutations or changes in the expression levels of a number of U5 snRNP proteins (PRPF6, PRPF8, EFTUD2, DDX23, and SNRNP40) have been associated with human cancers. How and why variants in ubiquitously expressed spliceosome proteins required for pre-mRNA splicing in all human cells result in tissue-restricted disease phenotypes is not clear. Additionally, why variants in different, yet interacting, proteins making up the same core spliceosome snRNP result in completely distinct disease outcomes - RP, craniofacial defects or cancer - is unclear. In this review, we define the roles of different U5 snRNP proteins in RP, craniofacial disorders and cancer, including how disease-associated genetic variants affect pre-mRNA splicing and the proposed disease mechanisms. We then propose potential hypotheses for how U5 snRNP variants cause tissue specificity resulting in the restricted and distinct human disorders.
Copyright © 2021 Wood, Eadsforth, Newman and O’Keefe.

Entities:  

Keywords:  Burn-McKeown syndrome; U5 snRNP; cancer; disease; mandibulofacial dysostosis Guion-Almeida type; pre-mRNA splicing; retinitis pigmentosa; spliceosome

Year:  2021        PMID: 33584830      PMCID: PMC7876476          DOI: 10.3389/fgene.2021.636620

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  192 in total

Review 1.  Pre-mRNA splicing: awash in a sea of proteins.

Authors:  Melissa S Jurica; Melissa J Moore
Journal:  Mol Cell       Date:  2003-07       Impact factor: 17.970

2.  Haploinsufficiency of a spliceosomal GTPase encoded by EFTUD2 causes mandibulofacial dysostosis with microcephaly.

Authors:  Matthew A Lines; Lijia Huang; Jeremy Schwartzentruber; Stuart L Douglas; Danielle C Lynch; Chandree Beaulieu; Maria Leine Guion-Almeida; Roseli Maria Zechi-Ceide; Blanca Gener; Gabriele Gillessen-Kaesbach; Caroline Nava; Geneviève Baujat; Denise Horn; Usha Kini; Almuth Caliebe; Yasemin Alanay; Gulen Eda Utine; Dorit Lev; Jürgen Kohlhase; Arthur W Grix; Dietmar R Lohmann; Ute Hehr; Detlef Böhm; Jacek Majewski; Dennis E Bulman; Dagmar Wieczorek; Kym M Boycott
Journal:  Am J Hum Genet       Date:  2012-02-02       Impact factor: 11.025

3.  Molecular mechanisms of photoreceptor degeneration in RP caused by IMPDH1 mutations.

Authors:  Aileen Aherne; Avril Kennan; Paul F Kenna; Niamh McNally; G Jane Farrar; Pete Humphries
Journal:  Adv Exp Med Biol       Date:  2006       Impact factor: 2.622

4.  Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.

Authors:  Qun Pan; Ofer Shai; Leo J Lee; Brendan J Frey; Benjamin J Blencowe
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

Review 5.  The role of Snu114p during pre-mRNA splicing.

Authors:  Lily Novak Frazer; Verity Nancollis; Raymond T O'Keefe
Journal:  Biochem Soc Trans       Date:  2008-06       Impact factor: 5.407

6.  The human U5-220kD protein (hPrp8) forms a stable RNA-free complex with several U5-specific proteins, including an RNA unwindase, a homologue of ribosomal elongation factor EF-2, and a novel WD-40 protein.

Authors:  T Achsel; K Ahrens; H Brahms; S Teigelkamp; R Lührmann
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

7.  A novel missense SNRNP200 mutation associated with autosomal dominant retinitis pigmentosa in a Chinese family.

Authors:  Tiecheng Liu; Xin Jin; Xuemin Zhang; Huijun Yuan; Jing Cheng; Janet Lee; Baoquan Zhang; Maonian Zhang; Jing Wu; Lijuan Wang; Geng Tian; Weifeng Wang
Journal:  PLoS One       Date:  2012-09-19       Impact factor: 3.240

8.  Prp8 retinitis pigmentosa mutants cause defects in the transition between the catalytic steps of splicing.

Authors:  Megan Mayerle; Christine Guthrie
Journal:  RNA       Date:  2016-03-11       Impact factor: 4.942

Review 9.  Transcription and splicing: A two-way street.

Authors:  Michael Tellier; Isabella Maudlin; Shona Murphy
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-03-03       Impact factor: 9.957

10.  Oto-facial syndrome and esophageal atresia, intellectual disability and zygomatic anomalies - expanding the phenotypes associated with EFTUD2 mutations.

Authors:  Claudia Voigt; André Mégarbané; Kornelia Neveling; Johanna Christina Czeschik; Beate Albrecht; Bert Callewaert; Florian von Deimling; Andreas Hehr; Marie Falkenberg Smeland; Rainer König; Alma Kuechler; Carlo Marcelis; Maria Puiu; Willie Reardon; Hilde Monica Frostad Riise Stensland; Bernd Schweiger; Marloes Steehouwer; Christopher Teller; Marcel Martin; Sven Rahmann; Ute Hehr; Han G Brunner; Hermann-Josef Lüdecke; Dagmar Wieczorek
Journal:  Orphanet J Rare Dis       Date:  2013-07-24       Impact factor: 4.123

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  4 in total

1.  Reovirus μ2 protein modulates host cell alternative splicing by reducing protein levels of U5 snRNP core components.

Authors:  Simon Boudreault; Mathieu Durand; Carole-Anne Martineau; Jean-Pierre Perreault; Guy Lemay; Martin Bisaillon
Journal:  Nucleic Acids Res       Date:  2022-05-20       Impact factor: 19.160

2.  The Core Splicing Factors EFTUD2, SNRPB and TXNL4A Are Essential for Neural Crest and Craniofacial Development.

Authors:  Byung-Yong Park; Melanie Tachi-Duprat; Chibuike Ihewulezi; Arun Devotta; Jean-Pierre Saint-Jeannet
Journal:  J Dev Biol       Date:  2022-07-08

3.  Aberrant Retinal Pigment Epithelial Cells Derived from Induced Pluripotent Stem Cells of a Retinitis Pigmentosa Patient with the PRPF6 Mutation.

Authors:  Yuqin Liang; Feng Tan; Xihao Sun; Zekai Cui; Jianing Gu; Shengru Mao; Hon Fai Chan; Shibo Tang; Jiansu Chen
Journal:  Int J Mol Sci       Date:  2022-08-12       Impact factor: 6.208

4.  Over-activation of EFTUD2 correlates with tumor propagation and poor survival outcomes in hepatocellular carcinoma.

Authors:  C Lv; X J Li; L X Hao; S Zhang; Z Song; X D Ji; B Gong
Journal:  Clin Transl Oncol       Date:  2021-07-19       Impact factor: 3.405

  4 in total

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