Literature DB >> 33584573

Application of CRISPR/Cas for Diagnosis and Management of Viral Diseases of Banana.

Leena Tripathi1, Valentine Otang Ntui1, Jaindra Nath Tripathi1, P Lava Kumar2.   

Abstract

Viral diseases are significant biotic constraints for banana (Musa spp.) production as they affect the yield and limit the international movement of germplasm. Among all the viruses known to infect banana, the banana bunchy top virus and banana streak viruses are widespread and economically damaging. The use of virus-resistant bananas is the most cost-effective option to minimize the negative impacts of viral-diseases on banana production. CRISPR/Cas-based genome editing is emerging as the most powerful tool for developing virus-resistant crop varieties in several crops, including the banana. The availability of a vigorous genetic transformation and regeneration system and a well-annotated whole-genome sequence of banana makes it a compelling candidate for genome editing. A robust CRISPR/Cas9-based genome editing of the banana has recently been established, which can be applied in developing disease-resistant varieties. Recently, the CRISPR system was exploited to detect target gene sequences using Cas9, Cas12, Cas13, and Cas14 enzymes, thereby unveiling the use of this technology for virus diagnosis. This article presents a synopsis of recent advancements and perspectives on the application of CRISPR/Cas-based genome editing for diagnosing and developing resistance against banana viruses and challenges in genome-editing of banana.
Copyright © 2021 Tripathi, Ntui, Tripathi and Kumar.

Entities:  

Keywords:  BBTV; BSV; CRISPR/Cas; banana; diagnosis; disease-resistance; genome editing; viral diseases

Year:  2021        PMID: 33584573      PMCID: PMC7873300          DOI: 10.3389/fmicb.2020.609784

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  81 in total

Review 1.  CRISPR Applications in Plant Virology: Virus Resistance and Beyond.

Authors:  Natalia O Kalinina; Andrey Khromov; Andrew J Love; Michael E Taliansky
Journal:  Phytopathology       Date:  2019-11-13       Impact factor: 4.025

2.  Cas12aVDet: A CRISPR/Cas12a-Based Platform for Rapid and Visual Nucleic Acid Detection.

Authors:  Bei Wang; Rui Wang; Daqi Wang; Jian Wu; Jixi Li; Jin Wang; Huihui Liu; Yongming Wang
Journal:  Anal Chem       Date:  2019-09-11       Impact factor: 6.986

3.  Banana contains a diverse array of endogenous badnaviruses.

Authors:  Andrew D W Geering; Neil E Olszewski; Glyn Harper; Benham E L Lockhart; Roger Hull; John E Thomas
Journal:  J Gen Virol       Date:  2005-02       Impact factor: 3.891

4.  Nucleotide sequence of one component of the banana bunchy top virus genome contains a putative replicase gene.

Authors:  R M Harding; T M Burns; G Hafner; R G Dietzgen; J L Dale
Journal:  J Gen Virol       Date:  1993-03       Impact factor: 3.891

5.  Establishing a CRISPR-Cas-like immune system conferring DNA virus resistance in plants.

Authors:  Xiang Ji; Huawei Zhang; Yi Zhang; Yanpeng Wang; Caixia Gao
Journal:  Nat Plants       Date:  2015-09-28       Impact factor: 15.793

Review 6.  Gene Editing Approaches against Viral Infections and Strategy to Prevent Occurrence of Viral Escape.

Authors:  Martyn K White; Wenhui Hu; Kamel Khalili
Journal:  PLoS Pathog       Date:  2016-12-08       Impact factor: 6.823

7.  DNA-Free Genetically Edited Grapevine and Apple Protoplast Using CRISPR/Cas9 Ribonucleoproteins.

Authors:  Mickael Malnoy; Roberto Viola; Min-Hee Jung; Ok-Jae Koo; Seokjoong Kim; Jin-Soo Kim; Riccardo Velasco; Chidananda Nagamangala Kanchiswamy
Journal:  Front Plant Sci       Date:  2016-12-20       Impact factor: 5.753

8.  RNA virus interference via CRISPR/Cas13a system in plants.

Authors:  Rashid Aman; Zahir Ali; Haroon Butt; Ahmed Mahas; Fatimah Aljedaani; Muhammad Zuhaib Khan; Shouwei Ding; Magdy Mahfouz
Journal:  Genome Biol       Date:  2018-01-04       Impact factor: 13.583

9.  CRISPR/Cas9-mediated viral interference in plants.

Authors:  Zahir Ali; Aala Abulfaraj; Ali Idris; Shakila Ali; Manal Tashkandi; Magdy M Mahfouz
Journal:  Genome Biol       Date:  2015-11-11       Impact factor: 13.583

10.  Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence.

Authors:  Michael A Gomez; Z Daniel Lin; Theodore Moll; Raj Deepika Chauhan; Luke Hayden; Kelley Renninger; Getu Beyene; Nigel J Taylor; James C Carrington; Brian J Staskawicz; Rebecca S Bart
Journal:  Plant Biotechnol J       Date:  2018-10-05       Impact factor: 9.803

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  7 in total

Review 1.  Genome Editing for Sustainable Agriculture in Africa.

Authors:  Leena Tripathi; Kanwarpal S Dhugga; Valentine O Ntui; Steven Runo; Easter D Syombua; Samwel Muiruri; Zhengyu Wen; Jaindra N Tripathi
Journal:  Front Genome Ed       Date:  2022-05-12

2.  Cas14a1-Mediated Nucleic Acid Diagnostics for Spinal Muscular Atrophy.

Authors:  Zhiqing Hu; Miaomiao Chen; Chunhua Zhang; Zhuo Li; Mai Feng; Lingqian Wu; Miaojin Zhou; Desheng Liang
Journal:  Biosensors (Basel)       Date:  2022-04-23

Review 3.  CRISPR-Cas-Led Revolution in Diagnosis and Management of Emerging Plant Viruses: New Avenues Toward Food and Nutritional Security.

Authors:  Susheel Kumar Sharma; Om Prakash Gupta; Neeta Pathaw; Devender Sharma; Albert Maibam; Parul Sharma; Jyotsana Sanasam; Suhas Gorakh Karkute; Sandeep Kumar; Bijoya Bhattacharjee
Journal:  Front Nutr       Date:  2021-12-16

Review 4.  Control of Bacterial Diseases of Banana Using CRISPR/Cas-Based Gene Editing.

Authors:  Leena Tripathi; Valentine O Ntui; Jaindra N Tripathi
Journal:  Int J Mol Sci       Date:  2022-03-25       Impact factor: 5.923

5.  CRISPR-Based Isothermal Next-Generation Diagnostic Method for Virus Detection in Sugarbeet.

Authors:  Vanitharani Ramachandran; John J Weiland; Melvin D Bolton
Journal:  Front Microbiol       Date:  2021-07-08       Impact factor: 5.640

6.  Complete mitochondrial genome of banana skipper Erionota torus Evans (Lepidoptera: Hesperiidae) and phylogenetic analysis.

Authors:  Li-Na Liu; Li Zeng; Zhi-Xiang Guo; Bao-Ming Yang; Ke-Suo Yin; Chun-Mei Wang; Si-Jun Zheng
Journal:  Mitochondrial DNA B Resour       Date:  2021-06-23       Impact factor: 0.658

Review 7.  Genomic Approaches for Improvement of Tropical Fruits: Fruit Quality, Shelf Life and Nutrient Content.

Authors:  Malarvizhi Mathiazhagan; Bhavya Chidambara; Laxman R Hunashikatti; Kundapura V Ravishankar
Journal:  Genes (Basel)       Date:  2021-11-25       Impact factor: 4.096

  7 in total

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