Literature DB >> 33578691

HR-MAS NMR Applications in Plant Metabolomics.

Dieuwertje Augustijn1, Huub J M de Groot1, A Alia1,2.   

Abstract

Metabolomics is used to reduce the complexity of plants and to understand the underlying pathways of the plant phenotype. The metabolic profile of plants can be obtained by mass spectrometry or liquid-state NMR. The extraction of metabolites from the sample is necessary for both techniques to obtain the metabolic profile. This extraction step can be eliminated by making use of high-resolution magic angle spinning (HR-MAS) NMR. In this review, an HR-MAS NMR-based workflow is described in more detail, including used pulse sequences in metabolomics. The pre-processing steps of one-dimensional HR-MAS NMR spectra are presented, including spectral alignment, baseline correction, bucketing, normalisation and scaling procedures. We also highlight some of the models which can be used to perform multivariate analysis on the HR-MAS NMR spectra. Finally, applications of HR-MAS NMR in plant metabolomics are described and show that HR-MAS NMR is a powerful tool for plant metabolomics studies.

Entities:  

Keywords:  HR-MAS NMR; metabolomics; multivariate analysis; plants

Mesh:

Year:  2021        PMID: 33578691      PMCID: PMC7916392          DOI: 10.3390/molecules26040931

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  80 in total

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Journal:  J Exp Bot       Date:  2017-04-01       Impact factor: 6.992

3.  Exploring high-resolution magic angle spinning (HR-MAS) NMR spectroscopy for metabonomic analysis of apples.

Authors:  Martina Vermathen; Mattia Marzorati; Peter Vermathen
Journal:  Chimia (Aarau)       Date:  2012       Impact factor: 1.509

4.  1H HR-MAS NMR-based metabolomics study of different persimmon cultivars (Diospyros kaki) during fruit development.

Authors:  Alan Diego da Conceição Santos; Flávia Aparecida Fonseca; Lívia Macedo Dutra; Maria de Fátima Costa Santos; Leociley Rocha Alencar Menezes; Francinete Ramos Campos; Noemi Nagata; Ricardo Ayub; Andersson Barison
Journal:  Food Chem       Date:  2017-06-23       Impact factor: 7.514

Review 5.  Magic Angle Spinning (MAS) NMR: a new tool to study the spatial and electronic structure of photosynthetic complexes.

Authors:  A Alia; Swapna Ganapathy; Huub J M de Groot
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

6.  A new metabonomic strategy for analysing the growth process of the poplar tree.

Authors:  Susanne Wiklund; Marlene Karlsson; Henrik Antti; Dan Johnels; Michael Sjöström; Gunnar Wingsle; Ulf Edlund
Journal:  Plant Biotechnol J       Date:  2005-05       Impact factor: 9.803

7.  High-Resolution Magic Angle Spinning (HR-MAS) NMR-Based Fingerprints Determination in the Medicinal Plant Berberis laurina.

Authors:  Sher Ali; Gul Badshah; Caroline Da Ros Montes D'Oca; Francinete Ramos Campos; Noemi Nagata; Ajmir Khan; Maria de Fátima Costa Santos; Andersson Barison
Journal:  Molecules       Date:  2020-08-11       Impact factor: 4.411

8.  Metabolomics for organic food authentication: Results from a long-term field study in carrots.

Authors:  Elena Cubero-Leon; Olivier De Rudder; Alain Maquet
Journal:  Food Chem       Date:  2017-07-01       Impact factor: 7.514

Review 9.  Current Developments in µMAS NMR Analysis for Metabolomics.

Authors:  Covadonga Lucas-Torres; Alan Wong
Journal:  Metabolites       Date:  2019-02-06

10.  Exploring abiotic stress on asynchronous protein metabolism in single kernels of wheat studied by NMR spectroscopy and chemometrics.

Authors:  H Winning; N Viereck; B Wollenweber; F H Larsen; S Jacobsen; I Søndergaard; S B Engelsen
Journal:  J Exp Bot       Date:  2009       Impact factor: 6.992

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Review 2.  The exposome paradigm to predict environmental health in terms of systemic homeostasis and resource balance based on NMR data science.

Authors:  Jun Kikuchi; Shunji Yamada
Journal:  RSC Adv       Date:  2021-09-13       Impact factor: 4.036

Review 3.  NMR and Metabolomics-A Roadmap for the Future.

Authors:  David S Wishart; Leo L Cheng; Valérie Copié; Arthur S Edison; Hamid R Eghbalnia; Jeffrey C Hoch; Goncalo J Gouveia; Wimal Pathmasiri; Robert Powers; Tracey B Schock; Lloyd W Sumner; Mario Uchimiya
Journal:  Metabolites       Date:  2022-07-23
  3 in total

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