| Literature DB >> 33578539 |
Lu Xu1,2, Shuyan Chen3, Libin Zhan1.
Abstract
BACKGROUND: Recently, the relationships between uncoupling protein-2 (UCP2) -866G/A (rs659366) and Ala55Val (rs660339) polymorphisms and the risk of type 2 diabetes mellitus (T2DM) have been explored considerably, but the results are greatly inconsistent. This meta-analysis was performed to further identify the association of UCP2 rs659366 and rs660339 with the risk of T2DM.Entities:
Mesh:
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Year: 2021 PMID: 33578539 PMCID: PMC7886456 DOI: 10.1097/MD.0000000000024464
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.817
Figure 1The flow diagram of the meta-analysis.
Basic characteristics of the studies included in this meta-analysis.
| First author, year | Country | Ethnicity | Case/Control | Source of control | Genotyping method | SNP type | HWE | NOS score |
| Gomathi 2019[ | India | Asian | 318/312 | Hospital-based | PCR-RFLP | rs659366 | 0.490 | 7 |
| Su 2018[ | China | Asian | 397/409 | Population-based | Mass ARRAY system | rs660399 | 0.751 | 7 |
| Shen 2014[ | China | Asian | 479/479 | Hospital-based | DNA sequencing | rs659366, rs660399 | 0.160/0.117 | 6 |
| Sun 2013[ | China | Asian | 471/78 | Hospital-based | PCR-RFLP | rs659366 | 0.630 | 5 |
| Qin 2013[ | China | Asian | 352/363 | Hospital-based | PCR-RFLP | rs659366, rs660399 | 0.487/0.022 | 6 |
| Souza 2013[ | Brazil | Caucasian | 981/534 | Hospital-based | TaqMan | rs659366, rs660399 | 0.932/0.536 | 6 |
| Hu 2010[ | China | Asian | 104/114 | Unknown | PCR+DHPLC | rs660339 | 0.460 | 5 |
| Hedari 2010[ | Iran | Asian | 75/75 | Population-based | PCR-RFLP | rs659366 | 0.125 | 7 |
| Crispim 2010[ | Brazil | Caucasian | 240/258 | Hospital-based | TaqMan | rs659366, rs660399 | 0.997/0.613 | 6 |
| Beitelshees 2010[ | Italy | Caucasian | 107/341 | Hospital-based | Pyrosequencing/TaqMan | rs659366 | 0.192 | 7 |
| Wang 2009[ | China | Asian | 470/217 | Population-based | PCR-RFLP | rs659366 | 0.634 | 6 |
| She 2009[ | China | Asian | 370/166 | Hospital-based | PCR-RFLP | rs659366 | 0.076 | 7 |
| Li 2008[ | China | Asian | 192/101 | Hospital-based | PCR-RFLP | rs659366 | 0.395 | 6 |
| Shen 2007[ | China | Asian | 229/196 | Hospital-based | PCR-RFLP | rs659366 | 0.894 | 5 |
| Gu 2007[ | China | Asian | 278/162 | Population-based | PCR-RFLP | rs659366 | 0.671 | 8 |
| Yu 2006[ | China | Asian | 122/55 | Hospital-based | PCR-RFLP | rs659366 | 0.893 | 7 |
| Pinelli 2006[ | Italy | Caucasian | 342/305 | Population-based | ASA/RT-PCR | rs659366 | 0.315 | 6 |
| Bullota 2005[ | Italy | Caucasian | 746/327 | Population-based | Unknown | rs659366 | 0.633 | 7 |
| Xiu 2004[ | China | Asian | 173/177 | Hospital-based | PCR-RFLP | rs660339 | 0.327 | 6 |
| Sasahara 2004[ | Japan | Asian | 413/172 | Hospital-based | PCR-RFLP | rs659366 | 0.446 | 4 |
| Ji 2004[ | Japan | Asian | 342/134 | Unknown | PCR-RFLP | rs659366 | 0.689 | 3 |
| D’Adamo 2004[ | Italy | Caucasian | 483/565 | Hospital-based | TaqMan | rs659366 | 0.069 | 3 |
| Cho 2004[ | Korea | Asian | 504/133 | Unknown | PCR-RFLP | rs660339 | 0.097 | 4 |
| Krempler 2002[ | Austria | Caucasian | 201/291 | Hospital-based | PCR-RFLP | rs659366 | 0.132 | 6 |
| Zheng 2000[ | China | Asian | 166/193 | Population-based | PCR-RFLP | rs660339 | 0.121 | 4 |
| Kubota 1998[ | Japan | Asian | 210/218 | Unknown | PCR-RFLP | rs660339 | 0.107 | 3 |
DHPLC = denaturing high-performance liquid chromatography, HWE = Hardy-Weinberg equilibrium, PCR = polymerase chain reaction, RFLP = restriction fragment length polymorphism, RT-PCR = (Real-time reverse transcription)-polymerase chain reaction.
Stratified meta-analyses of the correlation between UCP2 rs659366 polymorphism and risk of T2DM.
| A vs. G (allele model) | AG+AA vs. GG (dominant model) | AA vs. GG+AG (recessive model) | AA vs. GG (homozygous model) | AG vs. GG (heterozygous model) | ||||||||
| Characteristics | No. of studies | Sample size (case/control) | OR (95%CI) | OR (95%CI) | OR (95%CI) | OR (95%CI) | OR (95%CI) | |||||
| Total | 20 | 6985/4999 | 1.112 (1.009–1.224) | .032 | 1.189 (1.035–1.366) | .014 | 1.086 (0.945–1.248) | .246 | 1.207 (0.997–1.461) | .054 | 1.177 (1.032–1.342) | .015 |
| Ethnicity | ||||||||||||
| Asian | 13 | 4088/2479 | 1.132 (1.016–1.262) | .025 | 1.218 (1.046–1.418) | .011 | 1.105 (0.963–1.268) | .154 | 1.254 (1.022–1.540) | .031 | 1.198 (1.047–1.371) | .009 |
| Caucasian | 7 | 2897/2520 | 1.079 (0.896–1.298) | .423 | 1.154 (0.890–1.496) | .279 | 1.022 (0.750–1.393) | .891 | 1.117 (0.756–1.651) | .577 | 1.161 (0.899–1.499) | .252 |
| Source of control | ||||||||||||
| Hospital-based | 14 | 4732/3779 | 1.212 (1.104–1.330) | <.001 | 1.342 (1.151–1.565) | <.001 | 1.215 (1.077–1.371) | .002 | 1.424 (1.204–1.684) | <.001 | 1.308 (1.114–1.535) | .001 |
| Population-based | 5 | 1911/1086 | 0.841 (0.752–0.940) | .002 | 0.839 (0.716–0.984) | .031 | 0.725 (0.587–0.897) | .003 | 0.669 (0.525–0.851) | .001 | 0.896 (0.758–1.060) | .202 |
| Unknown | 1 | 342/134 | 1.098 (0.827–1.457) | .517 | 1.101 (0.702–1.726) | .675 | 1.175 (0.723–1.909) | .515 | 1.216 (0.684–2.164) | .505 | 1.054 (0.656–1.695) | .828 |
| Genotyping method | ||||||||||||
| Others | 7 | 3150/2677 | 1.040 (0.887–1.218) | .631 | 1.077 (0.873–1.330) | .488 | 1.011 (0.760–1.347) | .938 | 1.065 (0.751–1.512) | .723 | 1.076 (0.880–1.317) | .475 |
| PCR-RFLP | 13 | 3835/2322 | 1.161 (1.031–1.308) | .014 | 1.273 (1.072–1.512) | .006 | 1.117 (0.966–1.291) | .136 | 1.301 (1.044–1.621) | .019 | 1.258 (1.071–1.477) | .005 |
| Quality | ||||||||||||
| High | 16 | 5377/3964 | 1.126 (0.996–1.274) | .058 | 1.239 (1.045–1.469) | .014 | 1.048 (0.888–1.238) | .578 | 1.207 (0.948–1.538) | .127 | 1.239 (1.064–1.442) | .006 |
| Low | 4 | 1608/1035 | 1.069 (0.951–1.202) | .265 | 1.004 (0.848–1.190) | .960 | 1.245 (1.002–1.547) | .048 | 1.251 (0.980–1.598) | .073 | 0.938 (0.784–1.124) | .489 |
CI = confidence interval, OR = odds ratio, PCR-RFLP = polymerase chain reaction-restriction fragment length polymorphism, T2DM = type 2 diabetes mellitus, UCP2 = uncoupling protein-2.
Figure 2Forest plots for the correlation between UCP2 rs659366 polymorphism and risk of T2DM (A. allele model; B. dominant model; C. recessive model; D. homozygous model; E. homozygous model).
Stratified meta-analyses of the correlation between UCP2 rs660339 polymorphism and risk of T2DM.
| T vs. C (allele model) | CT+CC vs. TT (dominant model) | CC vs. TT+CT (recessive model) | CC vs. TT (homozygous model) | CT vs. TT (heterozygous model) | ||||||||
| Characteristics | No. of studies | Sample size (case/control) | OR (95%CI) | OR (95%CI) | OR (95%CI) | OR (95%CI) | OR (95%CI) | |||||
| Total | 9 | 3042/2388 | 1.066 (0.887–1.282) | .494 | 1.056 (0.827–1.349) | .663 | 1.132 (0.851–1.506) | .393 | 1.160 (0.803–1.676) | .430 | 1.026 (0.825–1.276) | .820 |
| Ethnicity | ||||||||||||
| Asian | 7 | 2016/1676 | 1.034 (0.825–1.296) | .774 | 0.994 (0.760–1.300) | .962 | 1.126 (0.767–1.653) | .545 | 1.107 (0.695–1.762) | .669 | 0.965 (0.776–1.199) | .745 |
| Caucasian | 2 | 1026/712 | 1.186 (0.777–1.808) | .429 | 1.291 (0.612–2.725) | .502 | 1.148 (0.882–1.494) | .305 | 1.369 (0.655–2.863) | .404 | 1.256 (0.592–2.668) | .553 |
| Source of control | ||||||||||||
| Hospital-based | 2 | 1671/1330 | 1.078 (0.912–1.272) | .379 | 1.083 (0.844–1.388) | .532 | 1.145 (0.840–1.560) | .391 | 1.176 (0.829–1.668) | .363 | 1.054 (0.811–1.370) | .692 |
| Population-based | 4 | 553/591 | 1.182 (0.798–1.751) | .404 | 1.217 (0.743–1.996) | .435 | 1.286 (0.717–2.309) | .399 | 1.431 (0.655–3.127) | .369 | 1.155 (0.770–1.732) | .486 |
| Unknown | 3 | 818/467 | 0.920 (0.775–1.091) | .337 | 0.852 (0.654–1.110) | .235 | 0.963 (0.665–1.395) | .843 | 0.865 (0.607–1.232) | .421 | 0.844 (0.561–1.271) | .418 |
| Genotyping method | ||||||||||||
| Others | 5 | 1989/1665 | 1.001 (0.799–1.254) | .995 | 1.013 (0.737–1.392) | .935 | 0.979 (0.734–1.306) | .886 | 1.005 (0.656–1.542) | .980 | 1.020 (0.765–1.359) | .893 |
| PCR-RFLP | 4 | 1053/723 | 1.164 (0.827–1.637) | .383 | 1.120 (0.723–1.737) | .612 | 1.397 (0.769–2.537) | .272 | 1.422 (0.691–2.925) | .339 | 1.035 (0.698–1.536) | .863 |
| Quality | ||||||||||||
| High | 6 | 2162/1842 | 1.115 (0.856–1.452) | .421 | 1.127 (0.809–1.570) | .480 | 1.191 (0.798–1.776) | .392 | 1.273 (0.749–2.162) | .372 | 1.084 (0.825–1.425) | .562 |
| Low | 3 | 880/546 | 0.975 (0.831–1.144) | .760 | 0.920 (0.682–1.241) | .586 | 1.046 (0.714–1.532) | .819 | 0.966 (0.695–1.343) | .837 | 0.904 (0.600–1.362) | .628 |
CI = confidence interval, OR = odds ratio, PCR-RFLP = polymerase chain reaction-restriction fragment length polymorphis, T2DM = type 2 diabetes mellitus, UCP2 = uncoupling protein-2.
Figure 3Forest plots for the correlation between UCP2 rs660339 polymorphism and risk of T2DM (A. allele model; B. dominant model; C. recessive model; D. homozygous model; E. homozygous model).
Publication bias of each model for UCP2 polymorphisms.
| SNP | ||
| A vs G (allele model) | 1.42 | .172 |
| AG+AA vs GG (dominant model) | 1.89 | .075 |
| AA vs GG+AG (recessive model) | 0.48 | .638 |
| AA vs GG (homozygous model) | 1.98 | .342 |
| AG vs GG (heterozygous model) | 2.08 | .052 |
| T vs C (allele model) | 1.29 | .240 |
| CT+CC vs TT (dominant model) | 0.91 | .392 |
| CC vs TT+CT (recessive model) | 1.63 | .147 |
| CC vs TT (homozygous model) | 1.49 | .180 |
| CT vs TT (heterozygous model) | 0.69 | .511 |
SNP = single nucleotide polymorphism, UCP2 = uncoupling protein-2.
Figure 4Begg funnel plot of publication bias for UCP2 rs659366 (A. allele model; B. dominant model; C. recessive model; D. homozygous model; E. homozygous model).
Figure 5Begg funnel plot of publication bias for UCP2 rs660339 (A. allele model; B. dominant model; C. recessive model; D. homozygous model; E. homozygous model).