Literature DB >> 33576325

Application of laser capture microdissection and PCR sequencing in the diagnosis of Coccidioides spp. infection: A case report and literature review in China.

Xinyu Yang1, Yinggai Song1, TianYu Liang1, Qiqi Wang1, Ruoyu Li1, Wei Liu1.   

Abstract

Coccidioidomycosis is endemic to California, Arizona, and Mexico. In recent years, the reported cases of coccidioidomycosis have increased in nonendemic regions. Here, we reported a case of imported pulmonary coccidioidomycosis in a Chinese patient. A 63-year-old man presented with dry cough and fatigue for 6 months, and a computed tomography scan revealed a solitary nodule in the right lower lung and small nodules in both lungs. The diagnosis of coccidioidomycosis was initially confirmed by histopathologic examination. The pathogen Coccidioides spp. was identified by laser capture microdissection (LCM) combined with subsequent molecular techniques based on the positive histopathologic features. Additionally, we reviewed 47 reported cases of coccidioidomycosis in China. The number of reported cases is increasing, and the incidence of disseminated infection has exhibited a trend of shifting towards healthy young adults in China. Since clinical presentations and imaging findings lack specificity, a majority of domestic cases of coccidioidomycosis were initially misdiagnosed as tumours or tuberculosis. Moreover, the diagnosis of endemic mycoses may be challenging because of their rarity and the limited availability of diagnostic tests. The diagnosis was mainly confirmed by histopathological examination. The species involved were identified based on positive cultures in only 4 cases. To our knowledge, this is the first study to use LCM and molecular techniques to identify Coccidioides spp. in the histopathologically positive but uncultivable specimen. Comparing with previous reported studies, LCM combined with nucleic acid amplification techniques improve the ability of species identification for the timely diagnosis of coccidioidomycosis.

Entities:  

Keywords:  Coccidioides spp; Coccidioidomycosis; laser capture microdissection; molecular diagnosis

Mesh:

Year:  2021        PMID: 33576325      PMCID: PMC7919914          DOI: 10.1080/22221751.2021.1889931

Source DB:  PubMed          Journal:  Emerg Microbes Infect        ISSN: 2222-1751            Impact factor:   7.163


  30 in total

1.  [Coccidioidomycosis in an infant].

Authors:  Wen-xian Ouyang; Jie-yu You; Yi-min Zhu
Journal:  Zhonghua Er Ke Za Zhi       Date:  2008-12

2.  Molecular identification of Coccidioides immitis in formalin-fixed, paraffin-embedded (FFPE) tissues from a Colombian patient.

Authors:  Cristina E Canteros; Alejandro Vélez H; Adriana I Toranzo; Roberto Suárez-Alvarez; Ángela Tobón O; María del Pilar Jimenez A; Ángela Restrepo M
Journal:  Med Mycol       Date:  2015-04-23       Impact factor: 4.076

3.  Development of a rapid, cost-effective TaqMan Real-Time PCR Assay for identification and differentiation of Coccidioides immitis and Coccidioides posadasii.

Authors:  Kelly W Sheff; Emily R York; Elizabeth M Driebe; Bridget M Barker; Steven D Rounsley; Victor G Waddell; Stephen M Beckstrom-Sternberg; James S Beckstrom-Sternberg; Paul S Keim; David M Engelthaler
Journal:  Med Mycol       Date:  2010-05       Impact factor: 4.076

4.  Molecular and phenotypic description of Coccidioides posadasii sp. nov., previously recognized as the non-California population of Coccidioides immitis.

Authors:  M C Fisher; G L Koenig; T J White; J W Taylor
Journal:  Mycologia       Date:  2002 Jan-Feb       Impact factor: 2.696

5.  Primary pulmonary coccidioidomycosis in China.

Authors:  Fen Lan; Yao-Zhi Tong; Hong Huang; Wei-Ning Xiong; Yong-Jian Xu; Sheng-Dao Xiong
Journal:  Respirology       Date:  2010-04-07       Impact factor: 6.424

Review 6.  Allergic Fungal Airway Disease.

Authors:  E M Rick; K Woolnough; C H Pashley; A J Wardlaw
Journal:  J Investig Allergol Clin Immunol       Date:  2016       Impact factor: 4.333

7.  Detection of Coccidioides species in clinical specimens by real-time PCR.

Authors:  M J Binnicker; S P Buckwalter; J J Eisberner; R A Stewart; A E McCullough; S L Wohlfiel; N L Wengenack
Journal:  J Clin Microbiol       Date:  2006-11-15       Impact factor: 5.948

8.  Genetic analysis of the endemic fungal pathogens Coccidioides posadasii and Coccidioides immitis in Mexico.

Authors:  Jorge A Luna-Isaac; Raquel Muñiz-Salazar; Raúl C Baptista-Rosas; Luis M Enríquez-Paredes; Laura R Castañón-Olivares; Cudberto Contreras-Pérez; Elva Bazán-Mora; Gloria M González; Marisela R González-Martínez
Journal:  Med Mycol       Date:  2014-02-13       Impact factor: 4.076

9.  Coccidioidomycosis as a rare cause of pneumonia in non-endemic areas: a short exposure history should not be ignored.

Authors:  Henry K H Kwok; Johnny W M Chan; Iris W S Li; Stephanie Y Y Chu; Chak Wah Lam
Journal:  Respirology       Date:  2009-05       Impact factor: 6.424

10.  Gliotoxin Induces Cofilin Phosphorylation to Promote Actin Cytoskeleton Dynamics and Internalization of Aspergillus fumigatus Into Type II Human Pneumocyte Cells.

Authors:  Changjian Zhang; Fangyan Chen; Xiaoyu Liu; Xuelin Han; Yingsong Hu; Xueting Su; Yong Chen; Yansong Sun; Li Han
Journal:  Front Microbiol       Date:  2019-06-18       Impact factor: 5.640

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