Literature DB >> 33575893

Molecular evolution of dengue virus types 1 and 4 in Korean travelers.

Eun-Ha Hwang1,2, Green Kim1,2, Hoyin Chung1,3, Hanseul Oh1, Jong-Hwan Park2, Gyeung Haeng Hur4, JungJoo Hong5, Bon-Sang Koo6.   

Abstract

Dengue virus (DV) is a mosquito-borne virus that is endemic to many tropical and subtropical areas. Recently, the annual incidence of DV infection has increased worldwide, including in Korea, due to global warming and increased global travel. We therefore sought to characterize the molecular and evolutionary features of DV-1 and DV-4 isolated from Korean overseas travelers. We used phylogenetic analysis based on the full coding region to classify isolates of DV-1 in Korea into genotype I (43251, KP406802), genotype IV (KP406803), and genotype V (KP406801). In addition, we found that strains of DV-4 belonged to genotype I (KP406806) and genotype II (43257). Evidence of positive selection in DV-1 strains was identified in the C, prM, NS2A, and NS5 proteins, whereas DV-4 showed positive selection only in the non-structural proteins NS2A, NS3, and NS5. The substitution rates per site per year were 5.58 × 10-4 and 6.72 × 10-4 for DV-1 and DV-4, respectively, and the time of the most recent common ancestor was determined using the Bayesian skyline coalescent method. In this study, the molecular, phylogenetic, and evolutionary characteristics of Korean DV-1 and DV-4 isolates were evaluated for the first time.

Entities:  

Year:  2021        PMID: 33575893     DOI: 10.1007/s00705-021-04973-8

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  18 in total

Review 1.  Immune-mediated cytokine storm and its role in severe dengue.

Authors:  Anon Srikiatkhachorn; Anuja Mathew; Alan L Rothman
Journal:  Semin Immunopathol       Date:  2017-04-11       Impact factor: 9.623

Review 2.  Dengue.

Authors:  Annelies Wilder-Smith; Eng-Eong Ooi; Olaf Horstick; Bridget Wills
Journal:  Lancet       Date:  2019-01-26       Impact factor: 79.321

3.  Datamonkey 2.0: A Modern Web Application for Characterizing Selective and Other Evolutionary Processes.

Authors:  Steven Weaver; Stephen D Shank; Stephanie J Spielman; Michael Li; Spencer V Muse; Sergei L Kosakovsky Pond
Journal:  Mol Biol Evol       Date:  2018-03-01       Impact factor: 16.240

4.  [Exercise in thin air].

Authors:  S Oseid
Journal:  Tidsskr Nor Laegeforen       Date:  1966-07-15

5.  Early Dengue infection and outcome study (EDEN) - study design and preliminary findings.

Authors:  Jenny G H Low; Eng-Eong Ooi; Thomas Tolfvenstam; Yee-Sin Leo; Martin L Hibberd; Lee-Ching Ng; Yee-Ling Lai; Grace S L Yap; Chenny S C Li; Subhash G Vasudevan; Adrian Ong
Journal:  Ann Acad Med Singapore       Date:  2006-11       Impact factor: 2.473

6.  Dengue serotype-specific differences in clinical manifestation, laboratory parameters and risk of severe disease in adults, singapore.

Authors:  Chee-Fu Yung; Kim-Sung Lee; Tun-Linn Thein; Li-Kiang Tan; Victor C Gan; Joshua G X Wong; David C Lye; Lee-Ching Ng; Yee-Sin Leo
Journal:  Am J Trop Med Hyg       Date:  2015-03-30       Impact factor: 2.345

7.  Comparison of the Epidemiological Aspects of Imported Dengue Cases between Korea and Japan, 2006-2010.

Authors:  Young Eui Jeong; Won-Chang Lee; Jung Eun Cho; Myung-Guk Han; Won-Ja Lee
Journal:  Osong Public Health Res Perspect       Date:  2015-12-12

8.  Potential effects of climate change on dengue transmission dynamics in Korea.

Authors:  Hyojung Lee; Jung Eun Kim; Sunmi Lee; Chang Hyeong Lee
Journal:  PLoS One       Date:  2018-06-28       Impact factor: 3.240

Review 9.  The Conserved Molecular Determinants of Virulence in Dengue Virus.

Authors:  Zuleeza Ahmad; Chit Laa Poh
Journal:  Int J Med Sci       Date:  2019-01-24       Impact factor: 3.738

10.  The C-terminal 18 Amino Acid Region of Dengue Virus NS5 Regulates its Subcellular Localization and Contains a Conserved Arginine Residue Essential for Infectious Virus Production.

Authors:  Moon Y F Tay; Kate Smith; Ivan H W Ng; Kitti W K Chan; Yongqian Zhao; Eng Eong Ooi; Julien Lescar; Dahai Luo; David A Jans; Jade K Forwood; Subhash G Vasudevan
Journal:  PLoS Pathog       Date:  2016-09-13       Impact factor: 6.823

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  1 in total

1.  Global Evolutionary History and Dynamics of Dengue Viruses Inferred from Whole Genome Sequences.

Authors:  Caleb J Stica; Roberto A Barrero; Rachael Z Murray; Gregor J Devine; Matthew J Phillips; Francesca D Frentiu
Journal:  Viruses       Date:  2022-03-28       Impact factor: 5.818

  1 in total

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