| Literature DB >> 33574154 |
Theresa Hydes1, Michael Moore1, Beth Stuart1, Miranda Kim1, Fangzhong Su1, Colin Newell2,3, David Cable4, Alan Hales1,5, Nick Sheron6.
Abstract
OBJECTIVES: Most patients are unaware they have liver cirrhosis until they present with a decompensating event. We therefore aimed to develop and validate an algorithm to predict advanced liver disease (AdvLD) using data widely available in primary care. DESIGN, SETTING AND PARTICIPANTS: Logistic regression was performed on routinely collected blood result data from the University Hospital Southampton (UHS) information systems for 16 967 individuals who underwent an upper gastrointestinal endoscopy (2005-2016). Data were used to create a model aimed at detecting AdvLD: 'CIRRhosis Using Standard tests' (CIRRUS). Prediction of a first serious liver event (SLE) was then validated in two cohorts of 394 253 (UHS: primary and secondary care) and 183 045 individuals (Care and Health Information Exchange (CHIE): primary care). PRIMARY OUTCOME MEASURES: Model creation dataset: cirrhosis or portal hypertension. Validation datasets: SLE (gastro-oesophageal varices, liver-related ascites or cirrhosis).Entities:
Keywords: hepatobiliary disease; hepatology; preventive medicine; primary care
Year: 2021 PMID: 33574154 PMCID: PMC7925927 DOI: 10.1136/bmjopen-2020-044952
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
Figure 1Flow chart showing participants and exclusions for all three datasets. Validation data were calculated for each date on which a full set of tests were available. Definition of cirrhosis (model creation dataset): cirrhosis diagnosed according to a liver biopsy, fibroscan result >15 kPa or serum fibrosis markers (hyaluronic acid and collagen P3 peptide) within the cirrhotic range. Serious liver event (SLE): a hospital admission with an ICD code for varices, liver-related ascites or cirrhosis. CHIE, Care and Health Information Exchange; CIRRUS, CIRRhosis Using Standard tests; OGD, oesophagogastroduodenoscopy; UHS, University Hospital Southampton.
Sensitivity, specificity, positive and negative predictive values, and likelihood ratios of CIRRUS in the model creation dataset
| Cut-off | Event/Total | Prevalence of cirrhosis/portal hypertension | Sensitivity | Specificity | PPV | NPV | PLR | NLR |
|
| 931/16 967 | 0.05 | 0.55 | 0.99 | 0.71 | 0.97 | 43.02 | 0.45 |
|
| 931/16 967 | 0.05 | 0.64 | 0.98 | 0.63 | 0.98 | 29.15 | 0.37 |
|
| 931/16 967 | 0.05 | 0.77 | 0.94 | 0.43 | 0.99 | 12.81 | 0.24 |
CRAvG, crimson, red or amber test ‘vs’ green test result; CRvAG, crimson or red test ‘vs’ amber or green test result; CvRAG, crimson test ‘vs’ red, amber or green test result; NLR, negative likelihood ratio.; NPV, negative predictive value; PLR, positive likelihood ratio; PPV, positive predictive value.
Figure 2Area under curve (AUC) analysis for (A) validation dataset 1 (University Hospital Southampton) and (B) validation dataset 2 (Care and Health Information Exchange) for the prediction of a serious liver event (SLE) within 5 years of the index test.
Prediction of a first serious liver event (SLE), liver admission with or without SLE (liver disease or SLE), or mortality in validation dataset 1 (UHS cohort) and prediction of a first SLE or liver admission with or without SLE in validation dataset 2 (CHIE cohort), within 5 years of the CIRRUS index test
| CIRRUS | Risk factor | Event (SLE)/total | Prevalence | Sensitivity | Specificity | PPV | NPV | PLR | NLR | |
| Validation dataset 1 (UHS cohort) | ||||||||||
| SLE |
| Liver risk factor (alc/DM2/VH) | 1733/31 939 | 5.93 | 0.63 | 0.92 | 0.33 | 0.98 | 7.71 | 0.40 |
|
| 0.72 | 0.87 | 0.26 | 0.98 | 5.65 | 0.32 | ||||
|
| No liver risk factors | 1311/362 314 | 0.37 | 0.49 | 0.97 | 0.05 | 1.00 | 14.85 | 0.53 | |
|
| 0.57 | 0.94 | 0.04 | 1.00 | 10.18 | 0.46 | ||||
|
| Alcohol | 1053/10 642 | 10.89 | 0.76 | 0.87 | 0.42 | 0.97 | 5.91 | 0.28 | |
|
| 0.83 | 0.82 | 0.35 | 0.97 | 4.48 | 0.21 | ||||
|
| Type 2 diabetes | 649/20 499 | 3.35 | 0.48 | 0.94 | 0.21 | 0.98 | 7.53 | 0.56 | |
|
| 0.58 | 0.89 | 0.16 | 0.98 | 5.50 | 0.47 | ||||
|
| Viral hepatitis | 288/1890 | 30.00 | 0.59 | 0.88 | 0.68 | 0.83 | 5.06 | 0.47 | |
|
| 0.72 | 0.83 | 0.65 | 0.87 | 4.26 | 0.33 | ||||
| Liver disease or SLE |
| Liver risk factor (alc/DM2/VH) | 4467/31 939 | 13.99 | 0.44 | 0.92 | 0.47 | 0.91 | 5.36 | 0.61 |
|
| 0.54 | 0.87 | 0.41 | 0.92 | 4.26 | 0.52 | ||||
|
| No liver risk factors | 5491/362 314 | 1.52 | 0.28 | 0.97 | 0.12 | 0.99 | 8.46 | 0.75 | |
|
| 0.35 | 0.94 | 0.09 | 0.99 | 6.33 | 0.69 | ||||
| Dead |
| Liver risk factor (alc/DM2/VH) | 4638/27 734 | 14.5 | 0.36 | 0.91 | 0.40 | 0.89 | 3.9 | 0.70 |
|
| 0.45 | 0.86 | 0.35 | 0.90 | 3.2 | 0.64 | ||||
|
| No liver risk factors | 4612/362 314 | 5.3 | 0.24 | 0.97 | 0.35 | 0.96 | 9.6 | 0.78 | |
|
| 0.31 | 0.95 | 0.28 | 0.96 | 6.8 | 0.72 | ||||
| Validation dataset 2 (CHIE cohort) | ||||||||||
| SLE |
| Liver risk factor (alc/DM2) | 876/35 832 | 2.54 | 0.49 | 0.97 | 0.29 | 0.99 | 15.56 | 0.53 |
|
| 0.59 | 0.93 | 0.18 | 0.99 | 8.62 | 0.44 | ||||
|
| No liver risk factors | 294/147 213 | 0.20 | 0.30 | 0.99 | 0.04 | 1.00 | 21.20 | 0.71 | |
|
| 0.39 | 0.97 | 0.02 | 1.00 | 11.36 | 0.63 | ||||
|
| Alcohol | 636/14 666 | 4.55 | 0.56 | 0.95 | 0.36 | 0.98 | 11.57 | 0.47 | |
|
| 0.65 | 0.90 | 0.25 | 0.98 | 6.82 | 0.38 | ||||
|
| Type 2 diabetes | 441/23 896 | 1.92 | 0.41 | 0.97 | 0.24 | 0.99 | 16.35 | 0.60 | |
|
| 0.52 | 0.94 | 0.15 | 0.99 | 8.91 | 0.51 | ||||
| Liver disease or SLE |
| Liver risk factor (alc/DM2) | 2259/35 832 | 6.30 | 0.28 | 0.97 | 0.37 | 0.95 | 8.88 | 0.74 |
|
| 0.37 | 0.93 | 0.27 | 0.96 | 5.40 | 0.68 | ||||
|
| No liver risk factors | 1985/147 213 | 1.35 | 0.10 | 0.99 | 0.09 | 0.99 | 7.36 | 0.91 | |
|
| 0.15 | 0.97 | 0.06 | 0.99 | 4.41 | 0.88 | ||||
Validation dataset 1 (UHS cohort) liver risk factors: any of the following preidentified risk factors for liver disease: alcohol (previous admission with an alcohol ICD code), diabetes (elevated HbA1C or a previous admission with type 2 diabetes), viral hepatitis (HBsAg, HBV DNA or HCV RNA).
Validation dataset 2 (CHIE cohort) liver risk factors: any of the following preidentified risk factors for liver disease: alcohol (previous admission with an alcohol ICD code, harmful dependent drinking or an alcohol comorbidity in the primary care record) or diabetes (type 2 diabetes in primary or secondary care records).
In each dataset, the control population were patients with no liver admissions.
An SLE was defined as a hospital admission with an ICD code for either varices, liver-related ascites or cirrhosis.
CHIE, Care and Health Information Exchange; CIRRUS, CIRRhosis Using Standard tests; CRvAG, crimson or red test ‘vs’ amber or green result; CvRAG, crimson test ‘vs’ red, amber or green result; DM2, type 2 diabetes mellitus; NLR, negative likelihood ratio; NPV, negative predictive value; PLR, positive likelihood ratio; PPV, positive predictive value; SLE, serious liver event; UHS, University Hospital Southampton.
Figure 3Kaplan-Meier curves for the time from the CIRRUS index test to the first serious liver event (SLE) ‘vs’ no liver disease controls in years, categorised according to liver risk factors and severity grades for (A) validation dataset 1 (University Hospital Southampton) and (B) validation dataset 2 (Care and Health Information Exchange). CIRRUS, CIRRhosis Using Standard tests.