Literature DB >> 33572130

Hyperdimensional Imaging Contrast Using an Optical Fiber.

Jenu V Chacko1, Han Nim Lee1,2, Wenxin Wu1, Marisa S Otegui1,2, Kevin W Eliceiri1,3,4,5.   

Abstract

Fluorescence properties of a molecule can be used to study the structural and functional nature of biological processes. Physical properties, including fluorescence lifetime, emission spectrum, emission polarization, and others, help researchers probe a molecule, produce desired effects, and infer causes and consequences. Correlative imaging techniques such as hyperdimensional imaging microscopy (HDIM) combine the physical properties and biochemical states of a fluorophore. Here we present a fiber-based imaging system that can generate hyper-dimensional contrast by combining multiple fluorescence properties into a single fluorescence lifetime decay curve. Fluorescence lifetime imaging microscopy (FLIM) with controlled excitation polarization and temporally dispersed emission can generate a spectrally coded, polarization-filtered lifetime distribution for a pixel. This HDIM scheme generates a better contrast between different molecules than that from individual techniques. This setup uses only a single detector and is simpler to implement, modular, cost-efficient, and adaptable to any existing FLIM microscope. We present higher contrast data from Arabidopsis thaliana epidermal cells based on intrinsic anthocyanin emission properties under multiphoton excitation. This work lays the foundation for an alternative hyperdimensional imaging system and demonstrates that contrast-based imaging is useful to study cellular heterogeneity in biological samples.

Entities:  

Keywords:  FLIM; anisotropy; anthocyanin imaging; fluorescence imaging; fluorescence lifetime; hyper dimensional contrast imaging; hyper dimensional imaging; hyperspectral imaging; polarization

Year:  2021        PMID: 33572130      PMCID: PMC7914562          DOI: 10.3390/s21041201

Source DB:  PubMed          Journal:  Sensors (Basel)        ISSN: 1424-8220            Impact factor:   3.576


  21 in total

1.  Fluorescence lifetime imaging by time-correlated single-photon counting.

Authors:  W Becker; A Bergmann; M A Hink; K König; K Benndorf; C Biskup
Journal:  Microsc Res Tech       Date:  2004-01-01       Impact factor: 2.769

2.  Abiotic stresses induce different localizations of anthocyanins in Arabidopsis.

Authors:  Nik Kovinich; Gilbert Kayanja; Alexandra Chanoca; Marisa S Otegui; Erich Grotewold
Journal:  Plant Signal Behav       Date:  2015

Review 3.  Fluorescence lifetime in cardiovascular diagnostics.

Authors:  Laura Marcu
Journal:  J Biomed Opt       Date:  2010 Jan-Feb       Impact factor: 3.170

4.  Imaging Vacuolar Anthocyanins with Fluorescence Lifetime Microscopy (FLIM).

Authors:  Alexandra Chanoca; Brian Burkel; Erich Grotewold; Kevin W Eliceiri; Marisa S Otegui
Journal:  Methods Mol Biol       Date:  2018

5.  Anthocyanin Vacuolar Inclusions Form by a Microautophagy Mechanism.

Authors:  Alexandra Chanoca; Nik Kovinich; Brian Burkel; Samantha Stecha; Andres Bohorquez-Restrepo; Takashi Ueda; Kevin W Eliceiri; Erich Grotewold; Marisa S Otegui
Journal:  Plant Cell       Date:  2015-09-04       Impact factor: 11.277

6.  Multidimensional Fluorescence Microscopy for Simultaneous Functional and Structural Imaging.

Authors:  Klaus Suhling
Journal:  Biophys J       Date:  2019-04-22       Impact factor: 4.033

7.  Cellpose: a generalist algorithm for cellular segmentation.

Authors:  Carsen Stringer; Tim Wang; Michalis Michaelos; Marius Pachitariu
Journal:  Nat Methods       Date:  2020-12-14       Impact factor: 47.990

8.  Enhancing Biochemical Resolution by Hyperdimensional Imaging Microscopy.

Authors:  Alessandro Esposito; Ashok R Venkitaraman
Journal:  Biophys J       Date:  2019-04-22       Impact factor: 4.033

9.  Fast single-cell biochemistry: theory, open source microscopy and applications.

Authors:  Andrew L Trinh; Suzan Ber; Annie Howitt; Pablo Oriol Valls; Maximilian W Fries; Ashok R Venkitaraman; Alessandro Esposito
Journal:  Methods Appl Fluoresc       Date:  2019-08-29       Impact factor: 3.009

10.  Colour bio-factories: Towards scale-up production of anthocyanins in plant cell cultures.

Authors:  Ingo Appelhagen; Anders Keim Wulff-Vester; Micael Wendell; Anne-Kathrine Hvoslef-Eide; Julia Russell; Anne Oertel; Stefan Martens; Hans-Peter Mock; Cathie Martin; Andrea Matros
Journal:  Metab Eng       Date:  2018-06-08       Impact factor: 8.829

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.