Literature DB >> 33568133

Screening of Graves' disease susceptibility genes by whole exome sequencing in a three-generation family.

Zhuoqing Hu1, Wei Li2, Miaosheng Li3, Hao Wei3, Zhihui Hu3, Yanting Chen3, Ai Luo1, Wangen Li4.   

Abstract

BACKGROUND: Graves' disease(GD) has a tendency for familial aggregation, but it is uncommon to occur in more than two generations. However, little is known about susceptibility genes for GD in the three-generation family.
METHODS: DNA were extracted from three-generation familial GD patient with a strong genetic background in a Chinese Han population. The Whole Exome Sequencing (WES) was utilized to screen the genome for SNVs associated with GD and the Sanger Sequencing was used to confirm the potential disease-causing genes.
RESULTS: In the case study, there were five patients with Graves' disease(GD) from a three-generation family. The SNVs of MAP7D2(c. 452C > T: p. A151V), SLC1A7(c. 1204C > T: p. R402C), TRAF3IP3(c. 209A > T: p. N70I), PTPRB(c. 3472A > G: p. S1158G), PIK3R3(c. 121C > T: p. P41S), DISC1(c. 1591G > C: p. G531R) were found to be associated with the familial GD and the Sanger sequencing had confirmed these variations. Furthermore, PolyPhen-2 score showed that the variants in TRAF3IP3, PTPRB, PIK3R3 are more likely to change protein functions.
CONCLUSION: The MAP7D2, SLC1A7, TRAF3IP3, PTPRB, PIK3R3, DISC1 may be the candidate susceptibility genes for familial GD from a three generations family.

Entities:  

Keywords:  Graves’ disease; Susceptibility genes; Three generations; Whole exome Sequencing

Year:  2021        PMID: 33568133      PMCID: PMC7874465          DOI: 10.1186/s12920-020-00865-z

Source DB:  PubMed          Journal:  BMC Med Genomics        ISSN: 1755-8794            Impact factor:   3.063


  16 in total

1.  Evidence for a major role of heredity in Graves' disease: a population-based study of two Danish twin cohorts.

Authors:  T H Brix; K O Kyvik; K Christensen; L Hegedüs
Journal:  J Clin Endocrinol Metab       Date:  2001-02       Impact factor: 5.958

2.  Genome-wide scan of Graves' disease: evidence for linkage on chromosome 5q31 in Chinese Han pedigrees.

Authors:  Ying Jin; Weiping Teng; Songtao Ben; Xiaoyan Xiong; Jing Zhang; Shijie Xu; Yin Yao Shugart; Li Jin; Jialun Chen; Wei Huang
Journal:  J Clin Endocrinol Metab       Date:  2003-04       Impact factor: 5.958

3.  Identification of susceptibility loci for autoimmune thyroid disease to 5q31-q33 and Hashimoto's thyroiditis to 8q23-q24 by multipoint affected sib-pair linkage analysis in Japanese.

Authors:  K Sakai; S Shirasawa; N Ishikawa; K Ito; H Tamai; K Kuma; T Akamizu; M Tanimura; K Furugaki; K Yamamoto; T Sasazuki
Journal:  Hum Mol Genet       Date:  2001-06-15       Impact factor: 6.150

4.  5-HTTLPR and DISC1 risk genotypes for elevated PTSD symptoms in US military veterans.

Authors:  Keith A Young; Sandra B Morissette; Robert Jamroz; Eric C Meyer; Matthew S Stanford; Li Wan; Nathan A Kimbrel
Journal:  World Psychiatry       Date:  2017-02       Impact factor: 49.548

Review 5.  GWAS in autoimmune thyroid disease: redefining our understanding of pathogenesis.

Authors:  Matthew J Simmonds
Journal:  Nat Rev Endocrinol       Date:  2013-03-26       Impact factor: 43.330

Review 6.  Global epidemiology of hyperthyroidism and hypothyroidism.

Authors:  Peter N Taylor; Diana Albrecht; Anna Scholz; Gala Gutierrez-Buey; John H Lazarus; Colin M Dayan; Onyebuchi E Okosieme
Journal:  Nat Rev Endocrinol       Date:  2018-03-23       Impact factor: 43.330

Review 7.  Genomic imprinting on the X chromosome: implications for brain and behavioral phenotypes.

Authors:  William Davies
Journal:  Ann N Y Acad Sci       Date:  2010-09       Impact factor: 5.691

8.  Common and unique susceptibility loci in Graves and Hashimoto diseases: results of whole-genome screening in a data set of 102 multiplex families.

Authors:  Yaron Tomer; Yoshiyuki Ban; Erlinda Concepcion; Giuseppe Barbesino; Ronald Villanueva; David A Greenberg; Terry F Davies
Journal:  Am J Hum Genet       Date:  2003-09-12       Impact factor: 11.025

9.  Skewed X chromosome inactivation and female preponderance in autoimmune thyroid disease: an association study and meta-analysis.

Authors:  Matthew J Simmonds; Fotini K Kavvoura; Oliver J Brand; Paul R Newby; Laura E Jackson; Chantal E Hargreaves; Jayne A Franklyn; Stephen C L Gough
Journal:  J Clin Endocrinol Metab       Date:  2013-12-20       Impact factor: 5.958

10.  Increased frequency of de novo copy number variants in congenital heart disease by integrative analysis of single nucleotide polymorphism array and exome sequence data.

Authors:  Joseph T Glessner; Alexander G Bick; Kaoru Ito; Jason Homsy; Laura Rodriguez-Murillo; Menachem Fromer; Erica Mazaika; Badri Vardarajan; Michael Italia; Jeremy Leipzig; Steven R DePalma; Ryan Golhar; Stephan J Sanders; Boris Yamrom; Michael Ronemus; Ivan Iossifov; A Jeremy Willsey; Matthew W State; Jonathan R Kaltman; Peter S White; Yufeng Shen; Dorothy Warburton; Martina Brueckner; Christine Seidman; Elizabeth Goldmuntz; Bruce D Gelb; Richard Lifton; Jonathan Seidman; Hakon Hakonarson; Wendy K Chung
Journal:  Circ Res       Date:  2014-09-09       Impact factor: 17.367

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.